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Mir9-3hg Gene Detail
Summary
  • Symbol
    Mir9-3hg
  • Name
    Mir9-3 host gene
  • Synonyms
    AI854517, BS-DRL1
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2142071
    NCBI Gene: 101694
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:79149774-79184151 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 45.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    548 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142071
 lncRNA gene Chr7:79148856-79184151 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007222
 lincRNA gene Chr7:81386518-81422208 (+)
A/J MGP_AJ_G0007219
 lincRNA gene Chr7:79509048-79544667 (+)
AKR/J MGP_AKRJ_G0007189
 lincRNA gene Chr7:81209603-81248256 (+)
BALB/cJ MGP_BALBcJ_G0007197
 lincRNA gene Chr7:79204675-79239238 (+)
C3H/HeJ MGP_C3HHeJ_G0007141
 lincRNA gene Chr7:81875929-81910392 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007367
 lincRNA gene Chr7:84588225-84622684 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006575
 lincRNA gene Chr7:82050476-82084771 (+)
CAST/EiJ MGP_CASTEiJ_G0007043
 lincRNA gene Chr7:72746418-72782189 (+)
CBA/J MGP_CBAJ_G0007124
 lincRNA gene Chr7:87418667-87455629 (+)
DBA/2J MGP_DBA2J_G0007145
 lincRNA gene Chr7:78084079-78118192 (+)
FVB/NJ MGP_FVBNJ_G0007168
 lincRNA gene Chr7:77996662-78030929 (+)
LP/J MGP_LPJ_G0007227
 lincRNA gene Chr7:82637001-82672348 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007144
 lincRNA gene Chr7:87604844-87640088 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007370
 lincRNA gene Chr7:80666273-80700429 (+)
PWK/PhJ MGP_PWKPhJ_G0006986
 lincRNA gene Chr7:71249883-71285388 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006894
 lincRNA gene Chr7:67651345-67689017 (+)
WSB/EiJ MGP_WSBEiJ_G0007104
 lincRNA gene Chr7:80989442-81027410 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Mir9-3hg
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    740
  • Tissues
    11
  • cDNA Data
    14
  • Literature Summary
    4
Sequences &
Gene Models
less
  • All Sequences
    54
  • RefSeq
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic 101694 NCBI Gene Model | MGI Sequence Detail 34378 C57BL/6J ±  kb
transcript NR_040311 RefSeq | MGI Sequence Detail 3741 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 18
    cDNA 14
    Primer pair 4

    Microarray probesets 2
References
more
  • Summaries
    All 29
    Developmental Gene Expression 4
    Phenotypes 11
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:340204 Lou MM, et al., Long noncoding RNA BS-DRL1 modulates the DNA damage response and genome stability by interacting with HMGB1 in neurons. Nat Commun. 2021 Jul 1;12(1):4075
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory