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C78334 Gene Detail
Summary
  • Symbol
    C78334
  • Name
    expressed sequence C78334
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2143395
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:95899987-95906793 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    281 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143395
 lncRNA gene Chr9:95899987-95906793 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004663
 antisense lncRNA gene Chr9:97179965-97181436 (-)
A/J MGP_AJ_G0004644
 antisense lncRNA gene Chr9:93803332-93804803 (-)
AKR/J MGP_AKRJ_G0004627
 antisense lncRNA gene Chr9:96074862-96076333 (-)
BALB/cJ MGP_BALBcJ_G0004628
 antisense lncRNA gene Chr9:93488465-93489936 (-)
C3H/HeJ MGP_C3HHeJ_G0004577
 antisense lncRNA gene Chr9:96502847-96509597 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004778
 antisense lncRNA gene Chr9:99963162-99964633 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0004533
 antisense lncRNA gene Chr9:96241864-96244431 (-)
CBA/J MGP_CBAJ_G0004571
 antisense lncRNA gene Chr9:103435828-103441989 (-)
DBA/2J MGP_DBA2J_G0004586
 antisense lncRNA gene Chr9:93328693-93335443 (-)
FVB/NJ MGP_FVBNJ_G0004604
 antisense lncRNA gene Chr9:92169741-92171212 (-)
LP/J MGP_LPJ_G0004667
 antisense lncRNA gene Chr9:97435844-97442604 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004592
 antisense lncRNA gene Chr9:105433587-105440346 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004777
 antisense lncRNA gene Chr9:96304960-96306970 (-)
PWK/PhJ MGP_PWKPhJ_G0004487
 antisense lncRNA gene Chr9:93484687-93491771 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004426
 antisense lncRNA gene Chr9:96316859-96324313 (-)
WSB/EiJ MGP_WSBEiJ_G0004576
 antisense lncRNA gene Chr9:96175231-96181995 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    24
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101867 Ensembl Gene Model | MGI Sequence Detail 6807 C57BL/6J ±  kb
transcript ENSMUST00000186632 Ensembl | MGI Sequence Detail 600 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory