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D630029K05Rik Gene Detail
Summary
  • Symbol
    D630029K05Rik
  • Name
    RIKEN cDNA D630029K05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2143561
    NCBI Gene: 103175
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:116800645-116805013 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 64.99 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    268 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143561
 lncRNA gene Chr10:116800612-116805013 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005159
 lincRNA gene Chr10:119779031-119783429 (+)
A/J MGP_AJ_G0005142
 lincRNA gene Chr10:115159279-115163677 (+)
AKR/J MGP_AKRJ_G0005120
 lincRNA gene Chr10:118506522-118510794 (+)
BALB/cJ MGP_BALBcJ_G0005122
 lincRNA gene Chr10:115558531-115562929 (+)
C3H/HeJ MGP_C3HHeJ_G0005071
 lincRNA gene Chr10:118728077-118732475 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005273
 lincRNA gene Chr10:123939275-123943673 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004678
 lincRNA gene Chr10:109749402-109754611 (+)
CAST/EiJ MGP_CASTEiJ_G0005019
 lincRNA gene Chr10:119032125-119036595 (+)
CBA/J MGP_CBAJ_G0005062
 lincRNA gene Chr10:128811192-128815590 (+)
DBA/2J MGP_DBA2J_G0005079
 lincRNA gene Chr10:114298477-114302875 (+)
FVB/NJ MGP_FVBNJ_G0005103
 lincRNA gene Chr10:113252297-113256695 (+)
LP/J MGP_LPJ_G0005160
 lincRNA gene Chr10:120366600-120370999 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005086
 lincRNA gene Chr10:131679492-131683890 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005278
 lincRNA gene Chr10:118572389-118576787 (+)
PWK/PhJ MGP_PWKPhJ_G0004969
 lincRNA gene Chr10:114398203-114402626 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004895
 lincRNA gene Chr10:117383175-117386299 (+)
WSB/EiJ MGP_WSBEiJ_G0005066
 lincRNA gene Chr10:118768492-118772876 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    8
  • cDNA Data
    6
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    37
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 103175 NCBI Gene Model | MGI Sequence Detail 4369 C57BL/6J ±  kb
transcript NR_027847 RefSeq | MGI Sequence Detail 2246 C57BL/6  
polypeptide Q8C3M5 UniProt | EBI | MGI Sequence Detail 119 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 6
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2143701
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:344964 Reddy HM, et al., Y chromosomal noncoding RNAs regulate autosomal gene expression via piRNAs in mouse testis. BMC Biol. 2021 Sep 9;19(1):198
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory