Tmem71 MGI Mouse Gene Detail - MGI:2146049

Symbol

Tmem71
Name

transmembrane protein 71

Feature Type

protein coding gene
IDs

MGI:2146049
NCBI Gene: 213068
Alliance

gene page
Transcription Start Sites

4 TSS

Sequence Map

Chr15:66398061-66432952 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 15, 29.28 cM
Mapping Data

1 experiment

SNPs within 2kb

1425 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2146049	protein coding gene	Chr15:66398061-66433085 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0021905	protein coding gene	Chr15:66034153-66074412 (-)
A/J	MGP_AJ_G0021864	protein coding gene	Chr15:63533594-63569742 (-)
AKR/J	MGP_AKRJ_G0021846	protein coding gene	Chr15:65293954-65330048 (-)
BALB/cJ	MGP_BALBcJ_G0021871	protein coding gene	Chr15:63718168-63753579 (-)
C3H/HeJ	MGP_C3HHeJ_G0021644	protein coding gene	Chr15:65408735-65444078 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0022310	protein coding gene	Chr15:68604735-68641733 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019847	protein coding gene	Chr15:60316527-60355790 (-)
CAST/EiJ	MGP_CASTEiJ_G0021163	protein coding gene	Chr15:66064647-66103259 (-)
CBA/J	MGP_CBAJ_G0021610	protein coding gene	Chr15:70873208-70908171 (-)
DBA/2J	MGP_DBA2J_G0021735	protein coding gene	Chr15:63319781-63354582 (-)
FVB/NJ	MGP_FVBNJ_G0021717	protein coding gene	Chr15:62355407-62391375 (-)
LP/J	MGP_LPJ_G0021807	protein coding gene	Chr15:65930700-65967246 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0021740	protein coding gene	Chr15:75969895-76008356 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022332	protein coding gene	Chr15:65668522-65706985 (-)
PWK/PhJ	MGP_PWKPhJ_G0020904	protein coding gene	Chr15:63409215-63445203 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0020745	protein coding gene	Chr15:65525666-65561935 (-)
WSB/EiJ	MGP_WSBEiJ_G0021215	protein coding gene	Chr15:65640278-65677382 (-)

Human Ortholog

TMEM71, transmembrane protein 71

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

TMEM71, transmembrane protein 71
Links

HGNC:26572

NCBI Gene ID: 137835

neXtProt AC: NX_Q6P5X7

UniProt: Q6P5X7
Chr Location

8q24.22; chr8:132685007-132775999 (-) GRCh38

MGI Vertebrate Homology

Tmem71 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: TMEM71
Gene Tree

Tmem71

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References

1 with disease annotations

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Phenotype Summary

28 phenotype references

All Mutations and Alleles

10
Chemically induced (other)

3
Endonuclease-mediated

3
Radiation induced

2
Targeted

2
Genomic Mutations

5 involving Tmem71
Incidental Mutations

CvDC
Find Mice (IMSR)

19 strains or lines available

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All GO Annotations

2
GO References

2

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

723
Tissues

17
cDNA Data

23
Literature Summary

1

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase tmem71

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All Sequences

36
RefSeq

4
UniProt

2
CCDS

CCDS37090.1

Ensembl

ENSMUSG00000036944 (Evidence)
NCBI Gene

213068

			Length	Strain/Species	Flank
genomic	ENSMUSG00000036944	Ensembl Gene Model \| MGI Sequence Detail	34892	C57BL/6J	± kb
transcript	ENSMUST00000048372	Ensembl \| MGI Sequence Detail	2988	Not Applicable
polypeptide	ENSMUSP00000044493	Ensembl \| MGI Sequence Detail	287	Not Applicable

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UniProt

2 Sequences
Protein Ontology

PR:000032114 transmembrane protein 71

(term hierarchy)
InterPro Domains

IPR027975 TMEM71 protein family

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All nucleic 23

cDNA 23

Microarray probesets 3

Summaries

All 51

Developmental Gene Expression 1

Diseases 1

Gene Ontology 2

Phenotypes 28
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;

TSS for Tmem71:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr134567	Chr15:66432938-66432949 (-)	8 bp
Tssr134566	Chr15:66432919-66432930 (-)	27 bp
Tssr134565	Chr15:66432846-66432916 (-)	71 bp
Tssr134564	Chr15:66432785-66432833 (-)	143 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24