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AU022754 Gene Detail
Summary
  • Symbol
    AU022754
  • Name
    expressed sequence AU022754
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2146143
    NCBI Gene: 105975
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:85465343-85477909 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 40.41 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    373 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2146143
 lncRNA gene Chr15:85464453-85477909 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005614
 lincRNA gene Chr15:86464368-86476933 (+)
A/J MGP_AJ_G0005601
 lincRNA gene Chr15:83246177-83258745 (+)
AKR/J MGP_AKRJ_G0005580
 lincRNA gene Chr15:85706717-85719306 (+)
BALB/cJ MGP_BALBcJ_G0005581
 lincRNA gene Chr15:83370467-83383031 (+)
C3H/HeJ MGP_C3HHeJ_G0005528
 lincRNA gene Chr15:85643590-85656210 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005739
 lincRNA gene Chr15:89703582-89716148 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005104
 lincRNA gene Chr15:79571658-79584163 (+)
CAST/EiJ MGP_CASTEiJ_G0005472
 lincRNA gene Chr15:86445816-86458410 (+)
CBA/J MGP_CBAJ_G0005518
 lincRNA gene Chr15:92681542-92694121 (+)
DBA/2J MGP_DBA2J_G0005533
 lincRNA gene Chr15:82707218-82719768 (+)
FVB/NJ MGP_FVBNJ_G0005560
 lincRNA gene Chr15:81780191-81792777 (+)
LP/J MGP_LPJ_G0005617
 lincRNA gene Chr15:86629868-86642486 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005545
 lincRNA gene Chr15:97381200-97393796 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005739
 lincRNA gene Chr15:85699662-85712225 (+)
PWK/PhJ MGP_PWKPhJ_G0005421
 lincRNA gene Chr15:82717798-82730797 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005340
 lincRNA gene Chr15:85403252-85416068 (+)
WSB/EiJ MGP_WSBEiJ_G0005522
 lincRNA gene Chr15:86200051-86212652 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    3
  • Radiation induced
    2
  • Genomic Mutations
    3 involving AU022754
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 105975 NCBI Gene Model | MGI Sequence Detail 12567 C57BL/6J ±  kb
transcript NR_040433 RefSeq | MGI Sequence Detail 2976 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 32
    Diseases 1
    Phenotypes 22
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory