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Rimoc1 Gene Detail
Summary
  • Symbol
    Rimoc1
  • Name
    RAB7A interacting MON1-CCZ1 complex subunit 1
  • Synonyms
    AW549877
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146232
    NCBI Gene: 106064
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:4011517-4025226 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 1.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    301 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2146232
 protein coding gene Chr15:4011517-4025228 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021684
 protein coding gene Chr15:846894-860581 (-)
A/J MGP_AJ_G0021644
 protein coding gene Chr15:875890-889707 (-)
AKR/J MGP_AKRJ_G0021622
 protein coding gene Chr15:861131-874810 (-)
BALB/cJ MGP_BALBcJ_G0021651
 protein coding gene Chr15:836241-849960 (-)
C3H/HeJ MGP_C3HHeJ_G0021427
 protein coding gene Chr15:868908-882626 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022090
 protein coding gene Chr15:934747-948453 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019628
 protein coding gene Chr15:724124-737796 (-)
CAST/EiJ MGP_CASTEiJ_G0020943
 protein coding gene Chr15:866418-880149 (-)
CBA/J MGP_CBAJ_G0021396
 protein coding gene Chr15:916554-930270 (-)
DBA/2J MGP_DBA2J_G0021520
 protein coding gene Chr15:848695-862386 (-)
FVB/NJ MGP_FVBNJ_G0021498
 protein coding gene Chr15:799764-813462 (-)
LP/J MGP_LPJ_G0021587
 protein coding gene Chr15:829527-843222 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021524
 protein coding gene Chr15:971127-984868 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022113
 protein coding gene Chr15:842630-856320 (-)
PWK/PhJ MGP_PWKPhJ_G0020687
 protein coding gene Chr15:856527-870209 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020525
 protein coding gene Chr15:909360-925646 (-)
WSB/EiJ MGP_WSBEiJ_G0020999
 protein coding gene Chr15:827951-842609 (-)



Homology
more
  • Human Ortholog
    RIMOC1, RAB7A interacting MON1-CCZ1 complex subunit 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RIMOC1, RAB7A interacting MON1-CCZ1 complex subunit 1
  • Synonyms
    C5orf51
  • Links
    NCBI Gene ID: 285636
    neXtProt AC: NX_A6NDU8
    UniProt: A6NDU8

  • Chr Location
    5p13.1; chr5:41904188-41921636 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    773
  • Tissues
    20
  • cDNA Data
    120
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000041935 Ensembl Gene Model | MGI Sequence Detail 13710 C57BL/6J ±  kb
    transcript ENSMUST00000046633 Ensembl | MGI Sequence Detail 5076 Not Applicable  
    polypeptide ENSMUSP00000038476 Ensembl | MGI Sequence Detail 294 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 120
      cDNA 120

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2145957, MGI:6885583
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 2
      Gene Ontology 3
      Phenotypes 8
    • Earliest
      J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory