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Krtap13-1 Gene Detail
Summary
  • Symbol
    Krtap13-1
  • Name
    keratin associated protein 13-1
  • Synonyms
    KAP13.1, MGC:41371
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146359
    NCBI Gene: 268905
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:88525750-88526499 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 51.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    94 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2146359
 protein coding gene Chr16:88525750-88526499 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022990
 protein coding gene Chr16:89545290-89546037 (+)
A/J MGP_AJ_G0022958
 protein coding gene Chr16:85390242-85390989 (+)
AKR/J MGP_AKRJ_G0022928
 protein coding gene Chr16:87994006-87994753 (+)
BALB/cJ MGP_BALBcJ_G0022960
 protein coding gene Chr16:85922587-85923334 (+)
C3H/HeJ MGP_C3HHeJ_G0022722
 protein coding gene Chr16:88553985-88554732 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023407
 protein coding gene Chr16:92416258-92417005 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020911
 protein coding gene Chr16:83219944-83220691 (+)
CAST/EiJ MGP_CASTEiJ_G0022244
 protein coding gene Chr16:88988556-88989303 (+)
CBA/J MGP_CBAJ_G0022691
 protein coding gene Chr16:96385084-96385831 (+)
DBA/2J MGP_DBA2J_G0022825
 protein coding gene Chr16:85323241-85323988 (+)
FVB/NJ MGP_FVBNJ_G0022800
 protein coding gene Chr16:84416164-84416911 (+)
LP/J MGP_LPJ_G0022894
 protein coding gene Chr16:89225604-89226351 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022819
 protein coding gene Chr16:100920024-100920771 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023425
 protein coding gene Chr16:88485207-88485954 (+)
PWK/PhJ MGP_PWKPhJ_G0021987
 protein coding gene Chr16:85476998-85477745 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021817
 protein coding gene Chr16:88045798-88046545 (+)
WSB/EiJ MGP_WSBEiJ_G0022292
 protein coding gene Chr16:88718263-88719010 (+)



Homology
more
  • Human Ortholog
    KRTAP13-1, keratin associated protein 13-1
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP13-1, keratin associated protein 13-1
  • Synonyms
    KAP13.1, KRTAP13.1
  • Links
    NCBI Gene ID: 140258
    neXtProt AC: NX_Q8IUC0
    UniProt: Q8IUC0

  • Chr Location
    21q22.11
  • Human Ortholog
    KRTAP13-2, keratin associated protein 13-2
  • Synonyms
    KAP13-2
  • Links
    NCBI Gene ID: 337959
    neXtProt AC: NX_Q52LG2
    UniProt: Q52LG2

  • Chr Location
    21q22.11; chr21:30371390-30372271 (-)  GRCh38
  • Human Ortholog
    KRTAP13-3, keratin associated protein 13-3
  • Synonyms
    KAP13.3
  • Links
    NCBI Gene ID: 337960
    neXtProt AC: NX_Q3SY46
    UniProt: Q3SY46

  • Chr Location
    21q22.11; chr21:30425380-30425926 (-)  GRCh38
  • Human Ortholog
    KRTAP13-4, keratin associated protein 13-4
  • Synonyms
    KAP13.4
  • Links
    NCBI Gene ID: 284827
    neXtProt AC: NX_Q3LI77
    UniProt: Q3LI77

  • Chr Location
    21q22.11; chr21:30430220-30431026 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 268905 NCBI Gene Model | MGI Sequence Detail 750 C57BL/6J ±  kb
transcript NM_183189 RefSeq | MGI Sequence Detail 766 C57BL/6  
polypeptide NP_899012 RefSeq | MGI Sequence Detail 168 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007951 Keratin-associated protein, PMG type
  • GlyGen
    Q8K198 1 site, 1 N-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Phenotypes 7
  • Earliest
    J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
  • Latest
    J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory