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AU015336 Gene Detail
Summary
  • Symbol
    AU015336
  • Name
    expressed sequence AU015336
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2146536
    NCBI Gene: 106309
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr16:25850560-25860018 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 17.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    540 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2146536
 lncRNA gene Chr16:25850560-25860018 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036920
 sense intronic lncRNA gene Chr16:23748124-23758281 (-)
A/J MGP_AJ_G0036908
 sense intronic lncRNA gene Chr16:22632309-22641228 (-)
AKR/J MGP_AKRJ_G0036855
 sense intronic lncRNA gene Chr16:23560012-23569432 (-)
BALB/cJ MGP_BALBcJ_G0036899
 sense intronic lncRNA gene Chr16:22838913-22847748 (-)
C3H/HeJ MGP_C3HHeJ_G0036584
 sense intronic lncRNA gene Chr16:23655791-23665227 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037412
 sense intronic lncRNA gene Chr16:24283356-24293252 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0034472
 sense intronic lncRNA gene Chr16:23223441-23232345 (-)
CAST/EiJ MGP_CASTEiJ_G0035773
 sense intronic lncRNA gene Chr16:23712421-23722390 (-)
CBA/J MGP_CBAJ_G0036559
 sense intronic lncRNA gene Chr16:25291071-25302933 (-)
DBA/2J MGP_DBA2J_G0036736
 sense intronic lncRNA gene Chr16:22578857-22588020 (-)
FVB/NJ MGP_FVBNJ_G0036687
 sense intronic lncRNA gene Chr16:22561803-22570671 (-)
LP/J MGP_LPJ_G0036782
 sense intronic lncRNA gene Chr16:23530700-23539479 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036693
 sense intronic lncRNA gene Chr16:24723528-24733761 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037528
 sense intronic lncRNA gene Chr16:23507949-23517496 (-)
PWK/PhJ MGP_PWKPhJ_G0035467
 sense intronic lncRNA gene Chr16:22871933-22881379 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035278
 sense intronic lncRNA gene Chr16:23282547-23291196 (-)
WSB/EiJ MGP_WSBEiJ_G0035973
 sense intronic lncRNA gene Chr16:23468468-23477096 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090203 Ensembl Gene Model | MGI Sequence Detail 9459 C57BL/6J ±  kb
transcript ENSMUST00000159040 Ensembl | MGI Sequence Detail 861 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory