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Vps37c Gene Detail
Summary
  • Symbol
    Vps37c
  • Name
    vacuolar protein sorting 37C
  • Synonyms
    5730409F24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2147661
    NCBI Gene: 107305
  • Alliance
    gene page
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:10666099-10691991 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 7.16 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    702 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2147661
 protein coding gene Chr19:10666095-10691992 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024855
 protein coding gene Chr19:8061189-8072531 (+)
A/J MGP_AJ_G0024823
 protein coding gene Chr19:7518624-7529909 (+)
AKR/J MGP_AKRJ_G0024798
 protein coding gene Chr19:7813069-7822972 (+)
BALB/cJ MGP_BALBcJ_G0024823
 protein coding gene Chr19:7560891-7572252 (+)
C3H/HeJ MGP_C3HHeJ_G0024589
 protein coding gene Chr19:7710072-7721416 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025271
 protein coding gene Chr19:8419678-8431036 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022698
 protein coding gene Chr19:7923242-7950198 (+)
CAST/EiJ MGP_CASTEiJ_G0024062
 protein coding gene Chr19:7334378-7360033 (+)
CBA/J MGP_CBAJ_G0024563
 protein coding gene Chr19:8465037-8476370 (+)
DBA/2J MGP_DBA2J_G0024690
 protein coding gene Chr19:7525101-7536389 (+)
FVB/NJ MGP_FVBNJ_G0024657
 protein coding gene Chr19:7555524-7581114 (+)
LP/J MGP_LPJ_G0024777
 protein coding gene Chr19:8021843-8033194 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024684
 protein coding gene Chr19:8352993-8378653 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025319
 protein coding gene Chr19:7827495-7838838 (+)
PWK/PhJ MGP_PWKPhJ_G0023807
 protein coding gene Chr19:6955076-6980840 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023612
 protein coding gene Chr19:6993835-7020363 (+)
WSB/EiJ MGP_WSBEiJ_G0024124
 protein coding gene Chr19:7710798-7736435 (+)



Homology
more
  • Human Ortholog
    VPS37C, VPS37C subunit of ESCRT-I
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VPS37C, VPS37C subunit of ESCRT-I
  • Links
    NCBI Gene ID: 55048
    neXtProt AC: NX_A5D8V6
    UniProt: A5D8V6

  • Chr Location
    11q12.2; chr11:61130257-61161615 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    4
  • cDNA Data
    57
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048832 Ensembl Gene Model | MGI Sequence Detail 25893 C57BL/6J ±  kb
transcript ENSMUST00000235927 Ensembl | MGI Sequence Detail 2690 Not Applicable  
polypeptide ENSMUSP00000158500 Ensembl | MGI Sequence Detail 352 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 57
    cDNA 57

    Microarray probesets 4
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 7
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory