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AU015836 Gene Detail
Summary
  • Symbol
    AU015836
  • Name
    expressed sequence AU015836
Location &
Maps
more
  • Sequence Map
    ChrX:93012265-93019076 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 41.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    178 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2147954
 protein coding gene ChrX:93012262-93019076 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035906
 protein coding gene ChrX:90349302-90356115 (+)
A/J MGP_AJ_G0035892
 protein coding gene ChrX:90438393-90445300 (+)
AKR/J MGP_AKRJ_G0035809
 protein coding gene ChrX:92818474-92828423 (+)
BALB/cJ MGP_BALBcJ_G0035876
 protein coding gene ChrX:89134654-89141462 (+)
C3H/HeJ MGP_C3HHeJ_G0035585
 protein coding gene ChrX:90710652-90718999 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036405
 protein coding gene ChrX:93111442-93118253 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033232
 protein coding gene ChrX:88614327-88620998 (+)
CAST/EiJ MGP_CASTEiJ_G0034870
 protein coding gene ChrX:75374869-75382406 (+)
CBA/J MGP_CBAJ_G0035559
 protein coding gene ChrX:95794817-95801605 (+)
DBA/2J MGP_DBA2J_G0035715
 protein coding gene ChrX:89689706-89696894 (+)
FVB/NJ MGP_FVBNJ_G0035654
 protein coding gene ChrX:89081884-89088703 (+)
LP/J MGP_LPJ_G0035803
 protein coding gene ChrX:91135939-91142786 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035688
 protein coding gene ChrX:100088973-100096427 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036432
 protein coding gene ChrX:90065543-90074236 (+)
PWK/PhJ MGP_PWKPhJ_G0034569
 protein coding gene ChrX:73169993-73176756 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034399
 protein coding gene ChrX:76237728-76244800 (+)
WSB/EiJ MGP_WSBEiJ_G0035011
 protein coding gene ChrX:88865052-88871844 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    24
Sequences &
Gene Models
less
  • All Sequences
    39
  • RefSeq
    1
  • UniProt
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081044 Ensembl Gene Model | MGI Sequence Detail 6812 C57BL/6J ±  kb
transcript ENSMUST00000120624 Ensembl | MGI Sequence Detail 674 Not Applicable  
polypeptide ENSMUSP00000112921 Ensembl | MGI Sequence Detail 112 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR039289 Mitochondrial intermembrane space import and assembly protein 40
Molecular
Reagents
less
  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory