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1700102P08Rik Gene Detail
Summary
  • Symbol
    1700102P08Rik
  • Name
    RIKEN cDNA 1700102P08 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2148248
    NCBI Gene: 112418
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:108270023-108275416 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 59.30 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    233 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148248
 protein coding gene Chr9:108270004-108288133 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035295
 protein coding gene Chr9:110347794-110368612 (+)
A/J MGP_AJ_G0035274
 protein coding gene Chr9:106303487-106321683 (+)
AKR/J MGP_AKRJ_G0035206
 protein coding gene Chr9:108959880-108977898 (+)
BALB/cJ MGP_BALBcJ_G0035268
 protein coding gene Chr9:105999822-106018228 (+)
C3H/HeJ MGP_C3HHeJ_G0034978
 protein coding gene Chr9:109352890-109371877 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035788
 protein coding gene Chr9:113346330-113367312 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032686
 protein coding gene Chr9:103735481-103752914 (+)
CAST/EiJ MGP_CASTEiJ_G0034289
 protein coding gene Chr9:109323593-109341451 (+)
CBA/J MGP_CBAJ_G0034946
 protein coding gene Chr9:117349384-117367244 (+)
DBA/2J MGP_DBA2J_G0035107
 protein coding gene Chr9:105759212-105777195 (+)
FVB/NJ MGP_FVBNJ_G0035055
 protein coding gene Chr9:104525701-104543759 (+)
LP/J MGP_LPJ_G0035183
 protein coding gene Chr9:110544615-110562639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035094
 protein coding gene Chr9:118923373-118941495 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035809
 protein coding gene Chr9:109247631-109265746 (+)
PWK/PhJ MGP_PWKPhJ_G0033996
 protein coding gene Chr9:106087101-106105676 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033831
 protein coding gene Chr9:109300474-109319933 (+)
WSB/EiJ MGP_WSBEiJ_G0034410
 protein coding gene Chr9:109128167-109147374 (+)



Homology
more
  • Human Ortholog
    C3orf62, chromosome 3 open reading frame 62
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C3orf62, chromosome 3 open reading frame 62
  • Synonyms
    MAPS
  • Links
    NCBI Gene ID: 375341
    neXtProt AC: NX_Q6ZUJ4
    UniProt: Q6ZUJ4

  • Chr Location
    3p21.31; chr3:49268596-49277232 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit male infertility associated with small testis and epididymis, azoospermia, and arrest of male meiosis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    735
  • Tissues
    11
  • cDNA Data
    12
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 112418 NCBI Gene Model | MGI Sequence Detail 5394 C57BL/6J ±  kb
    transcript NM_053216 RefSeq | MGI Sequence Detail 1101 C57BL/6  
    polypeptide Q9D9C7 UniProt | EBI | MGI Sequence Detail 252 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 12
      Primer pair 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2143096
    References
    more
    • Summaries
      All 24
      Developmental Gene Expression 1
      Gene Ontology 2
      Phenotypes 5
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:350572 Lin Z, et al., The male pachynema-specific protein MAPS drives phase separation in vitro and regulates sex body formation and chromatin behaviors in vivo. Cell Rep. 2024 Jan 23;43(1):113651
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory