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Krtap5-5 Gene Detail
Summary
  • Symbol
    Krtap5-5
  • Name
    keratin associated protein 5-5
  • Synonyms
    A030001H12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2149673
    NCBI Gene: 114666
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:141782532-141783708 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 87.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    166 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2149673
 protein coding gene Chr7:141782532-141783708 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033246
 protein coding gene Chr7:147351530-147352789 (-)
A/J MGP_AJ_G0033231
 protein coding gene Chr7:143211714-143212731 (-)
AKR/J MGP_AKRJ_G0033163
 protein coding gene Chr7:147211757-147213080 (-)
BALB/cJ MGP_BALBcJ_G0033232
 protein coding gene Chr7:142965101-142966280 (-)
C3H/HeJ MGP_C3HHeJ_G0032947
 protein coding gene Chr7:146945832-146946927 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033742
 protein coding gene Chr7:152801324-152804059 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030717
 protein coding gene Chr7:144389345-144390618 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0032918
 protein coding gene Chr7:158005677-158008349 (-)
DBA/2J MGP_DBA2J_G0033072
 protein coding gene Chr7:141134687-141135851 (+)
FVB/NJ MGP_FVBNJ_G0033022
 protein coding gene Chr7:141069777-141070794 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0033056
 protein coding gene Chr7:158620921-158622128 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0031827
 protein coding gene Chr7:132973599-132974817 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    KRTAP5-5, keratin associated protein 5-5
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP5-5, keratin associated protein 5-5
  • Synonyms
    KRTAP5-11, KRTAP5.5
  • Links
    NCBI Gene ID: 439915
    neXtProt AC: NX_Q701N2
    UniProt: Q701N2

  • Chr Location
    11p15.5
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 114666 NCBI Gene Model | MGI Sequence Detail 1177 C57BL/6J ±  kb
transcript NM_001037822 RefSeq | MGI Sequence Detail 1177 Not Specified  
polypeptide Q2TA51 UniProt | EBI | MGI Sequence Detail 241 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142002, MGI:2142296
References
more
  • Summaries
    All 26
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:202604 Nagamachi A, et al., Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7. Cancer Cell. 2013 Sep 9;24(3):305-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory