Dep1 Gene Detail

Summary

• Symbol
  Dep1
• Name
  diabetic embryopathy 1

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:2157364
  NCBI Gene: 170624
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:10532114-10536777 bp, - strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2157364	unclassified non-coding RNA gene	Chr17:10532114-10536777 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• Assay Results
  5
• Tissues
  3
• cDNA Data
  8
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  5

• NCBI Gene
  170624

Representative Sequences			Length	Strain/Species
transcript	AF032130	GenBank | ENA | DDBJ | MGI Sequence Detail	3309	Not Specified

Molecular
Reagents

• All nucleic 9

  cDNA 8

  Primer pair 1

  
  

  Microarray probesets 2

References

• Summaries
  All 7

  Developmental Gene Expression 1
• Earliest
  J:50495 Cai J, et al., Identification of Dep-1, a new gene regulated by the transcription factor Pax-3, as a marker for altered embryonic gene expression during diabetic pregnancy. Diabetes. 1998 Nov;47(11):1803-5