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Vmn1r4 Gene Detail
Summary
  • Symbol
    Vmn1r4
  • Name
    vomeronasal 1 receptor 4
  • Synonyms
    C230065D10Rik, V1rc21
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159457
    NCBI Gene: 171194
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:56901078-56934593 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 27.76 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    909 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159457
 protein coding gene Chr6:56901000-56935085 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030784
 protein coding gene Chr6:56388629-56423805 (+)
A/J MGP_AJ_G0030753
 protein coding gene Chr6:53777101-53810951 (+)
AKR/J MGP_AKRJ_G0030680
 protein coding gene Chr6:55580633-55619323 (+)
BALB/cJ MGP_BALBcJ_G0030765
 protein coding gene Chr6:54165760-54206776 (+)
C3H/HeJ MGP_C3HHeJ_G0030478
 protein coding gene Chr6:55642981-55679376 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031220
 protein coding gene Chr6:57670370-57704809 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028426
 protein coding gene Chr6:51344885-51349754 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0030452
 protein coding gene Chr6:60041771-60088761 (+)
DBA/2J MGP_DBA2J_G0030602
 protein coding gene Chr6:53670381-53709482 (+)
FVB/NJ MGP_FVBNJ_G0030554
 protein coding gene Chr6:53256890-53296956 (+)
LP/J MGP_LPJ_G0030687
 protein coding gene Chr6:56313979-56380011 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030588
 protein coding gene Chr6:62479848-62521899 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031250
 protein coding gene Chr6:55555900-55599914 (+)
PWK/PhJ MGP_PWKPhJ_G0029594
 protein coding gene Chr6:53353183-53422952 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029428
 protein coding gene Chr6:54956167-55033926 (+)
WSB/EiJ MGP_WSBEiJ_G0029958
 protein coding gene Chr6:55617078-55679098 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171194 NCBI Gene Model | MGI Sequence Detail 33516 C57BL/6J ±  kb
transcript NM_134176 RefSeq | MGI Sequence Detail 894 Not Specified  
polypeptide NP_598937 RefSeq | MGI Sequence Detail 297 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:2441897
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:74518 Rodriguez I, et al., Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Nat Neurosci. 2002 Feb;5(2):134-40
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory