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Vmn1r9 Gene Detail
Summary
  • Symbol
    Vmn1r9
  • Name
    vomeronasal 1 receptor 9
  • Synonyms
    V1rc30
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159466
    NCBI Gene: 171203
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:57047880-57048930 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 27.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    115 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159466
 protein coding gene Chr6:57043772-57051891 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030789
 protein coding gene Chr6:56589575-56597927 (+)
A/J MGP_AJ_G0030758
 protein coding gene Chr6:53889559-54000695 (+)
AKR/J MGP_AKRJ_G0030685
 protein coding gene Chr6:55696803-55789226 (+)
BALB/cJ MGP_BALBcJ_G0030770
 protein coding gene Chr6:54305251-54402132 (+)
C3H/HeJ MGP_C3HHeJ_G0030483
 protein coding gene Chr6:55771788-55912311 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031225
 protein coding gene Chr6:57878005-57879189 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0030457
 protein coding gene Chr6:60168366-60269291 (+)
DBA/2J MGP_DBA2J_G0030607
 protein coding gene Chr6:53782827-53862283 (+)
FVB/NJ MGP_FVBNJ_G0030558
 protein coding gene Chr6:53360139-53361321 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0030593
 protein coding gene Chr6:62642320-62645062 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0029962
 protein coding gene Chr6:55790563-55793787 (+)



Homology
more
  • Human Ortholog
    VN1R5, vomeronasal 1 receptor 5 (gene/pseudogene)
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VN1R5, vomeronasal 1 receptor 5 (gene/pseudogene)
  • Synonyms
    V1RL5
  • Links
    NCBI Gene ID: 317705
    neXtProt AC: NX_Q7Z5H4
    UniProt: Q7Z5H4

  • Chr Location
    1q44; chr1:247255972-247257210 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171203 NCBI Gene Model | MGI Sequence Detail 1051 C57BL/6J ±  kb
transcript NM_134185 RefSeq | MGI Sequence Detail 1051 Not Specified  
polypeptide NP_598946 RefSeq | MGI Sequence Detail 299 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:74518 Rodriguez I, et al., Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Nat Neurosci. 2002 Feb;5(2):134-40
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory