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Vmn1r227 Gene Detail
Summary
  • Symbol
    Vmn1r227
  • Name
    vomeronasal 1 receptor 227
  • Synonyms
    V1re6
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159627
    NCBI Gene: 171229
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:20955468-20956388 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 11.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    155 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159627
 protein coding gene Chr17:20950105-20959412 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015339
 unclassified non-coding RNA gene Chr17:19437031-19438056 (+)
A/J MGP_AJ_G0015314
 unclassified non-coding RNA gene Chr17:18638518-18639543 (+)
AKR/J MGP_AKRJ_G0015277
 unclassified non-coding RNA gene Chr17:18709479-18710504 (+)
BALB/cJ MGP_BALBcJ_G0015277
 unclassified non-coding RNA gene Chr17:18824594-18825619 (+)
C3H/HeJ MGP_C3HHeJ_G0015101
 unclassified non-coding RNA gene Chr17:19076304-19077329 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015731
 unclassified non-coding RNA gene Chr17:19986141-19987167 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0014652
 unclassified non-coding RNA gene Chr17:18719818-18720843 (+)
CBA/J MGP_CBAJ_G0015080
 unclassified non-coding RNA gene Chr17:20762072-20763097 (+)
DBA/2J MGP_DBA2J_G0015175
 unclassified non-coding RNA gene Chr17:18320897-18321922 (+)
FVB/NJ MGP_FVBNJ_G0015182
 unclassified non-coding RNA gene Chr17:18079082-18080107 (+)
LP/J MGP_LPJ_G0015255
 unclassified non-coding RNA gene Chr17:19381553-19382578 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015208
 unclassified non-coding RNA gene Chr17:20675132-20676158 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015771
 unclassified non-coding RNA gene Chr17:19032604-19033629 (+)
PWK/PhJ MGP_PWKPhJ_G0014442
 unclassified non-coding RNA gene Chr17:17171440-17172464 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014229
 unclassified non-coding RNA gene Chr17:17257023-17258051 (+)
WSB/EiJ MGP_WSBEiJ_G0014759
 unclassified non-coding RNA gene Chr17:19208340-19209365 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 171229 NCBI Gene Model | MGI Sequence Detail 921 C57BL/6J ±  kb
transcript NM_134195 RefSeq | MGI Sequence Detail 921 C57BL/6  
polypeptide NP_598956 RefSeq | MGI Sequence Detail 306 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 16
  • Earliest
    J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
  • Latest
    J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory