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Chodl Gene Detail
Summary
  • Symbol
    Chodl
  • Name
    chondrolectin
  • Synonyms
    3110074E07Rik, MT75, PRED12
  • Feature Type
    protein coding gene
  • IDs
    MGI:2179069
    NCBI Gene: 246048
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:78727836-78748621 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 45.39 cM, cytoband C3.2
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    648 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2179069
 protein coding gene Chr16:78727729-78748624 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022964
 protein coding gene Chr16:79103321-79125981 (+)
A/J MGP_AJ_G0022932
 protein coding gene Chr16:75619215-75640727 (+)
AKR/J MGP_AKRJ_G0022902
 protein coding gene Chr16:77893467-77915592 (+)
BALB/cJ MGP_BALBcJ_G0022934
 protein coding gene Chr16:76006591-76027470 (+)
C3H/HeJ MGP_C3HHeJ_G0022696
 protein coding gene Chr16:78345934-78369314 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023381
 protein coding gene Chr16:81638514-81673876 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020885
 protein coding gene Chr16:74026082-74046578 (+)
CAST/EiJ MGP_CASTEiJ_G0022218
 protein coding gene Chr16:78756225-78783371 (+)
CBA/J MGP_CBAJ_G0022665
 protein coding gene Chr16:85142214-85164465 (+)
DBA/2J MGP_DBA2J_G0022799
 protein coding gene Chr16:75451137-75473399 (+)
FVB/NJ MGP_FVBNJ_G0022774
 protein coding gene Chr16:74793134-74814877 (+)
LP/J MGP_LPJ_G0022868
 protein coding gene Chr16:78809738-78837515 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022793
 protein coding gene Chr16:88347981-88371822 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023399
 protein coding gene Chr16:78201832-78227088 (+)
PWK/PhJ MGP_PWKPhJ_G0021960
 protein coding gene Chr16:75666140-75687091 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021790
 protein coding gene Chr16:77899894-77921252 (+)
WSB/EiJ MGP_WSBEiJ_G0022266
 protein coding gene Chr16:78472725-78494561 (+)



Homology
more
  • Human Ortholog
    CHODL, chondrolectin
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CHODL, chondrolectin
  • Synonyms
    C21orf68, MT75, PRED12
  • Links
    NCBI Gene ID: 140578
    neXtProt AC: NX_Q9H9P2
    UniProt: Q9H9P2

  • Chr Location
    21q21.1; chr21:17901263-18267373 (+)  GRCh38
Human Diseases
less
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    32 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    901
  • Tissues
    153
  • cDNA Data
    15
  • Literature Summary
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022860 Ensembl Gene Model | MGI Sequence Detail 20786 C57BL/6J ±  kb
transcript ENSMUST00000069148 Ensembl | MGI Sequence Detail 2051 Not Applicable  
polypeptide ENSMUSP00000063961 Ensembl | MGI Sequence Detail 292 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 25
    Genomic 1
    cDNA 15
    Primer pair 9

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920461
References
more
  • Summaries
    All 74
    Developmental Gene Expression 10
    Diseases 2
    Gene Ontology 8
    Phenotypes 32
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory