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Ncoa5 Gene Detail
Summary
  • Symbol
    Ncoa5
  • Name
    nuclear receptor coactivator 5
  • Synonyms
    MGC:28864
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385165
    NCBI Gene: 228869
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:164842277-164876787 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 85.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    681 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385165
 protein coding gene Chr2:164842273-164876794 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026885
 protein coding gene Chr2:170523727-170558028 (-)
A/J MGP_AJ_G0026852
 protein coding gene Chr2:163542482-163577001 (-)
AKR/J MGP_AKRJ_G0026823
 protein coding gene Chr2:168423009-168459711 (-)
BALB/cJ MGP_BALBcJ_G0026861
 protein coding gene Chr2:163907573-163942247 (-)
C3H/HeJ MGP_C3HHeJ_G0026603
 protein coding gene Chr2:168772029-168807326 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027308
 protein coding gene Chr2:175464691-175499081 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024679
 protein coding gene Chr2:156948799-156983436 (-)
CAST/EiJ MGP_CASTEiJ_G0026061
 protein coding gene Chr2:169187814-169222664 (-)
CBA/J MGP_CBAJ_G0026580
 protein coding gene Chr2:181831567-181865999 (-)
DBA/2J MGP_DBA2J_G0026718
 protein coding gene Chr2:162706984-162741407 (-)
FVB/NJ MGP_FVBNJ_G0026684
 protein coding gene Chr2:161140425-161175709 (-)
LP/J MGP_LPJ_G0026820
 protein coding gene Chr2:170577067-170611333 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026703
 protein coding gene Chr2:185369515-185409129 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027365
 protein coding gene Chr2:168311789-168346317 (-)
PWK/PhJ MGP_PWKPhJ_G0025798
 protein coding gene Chr2:162311129-162344733 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025599
 protein coding gene Chr2:167220106-167258402 (-)
WSB/EiJ MGP_WSBEiJ_G0026134
 protein coding gene Chr2:169202184-169237326 (-)



Homology
more
  • Human Ortholog
    NCOA5, nuclear receptor coactivator 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NCOA5, nuclear receptor coactivator 5
  • Synonyms
    bA465L10.6, CIA
  • Links
    NCBI Gene ID: 57727
    neXtProt AC: NX_Q9HCD5
    UniProt: Q9HCD5

  • Chr Location
    20q13.12; chr20:46060991-46089962 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    31 phenotypes from 2 alleles in 3 genetic backgrounds
    9 phenotypes from multigenic genotypes
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice heterozygous for a knock-out allele exhibit impaired glucose homeostasis, liver dysplasia, increased hepatocellular carcinoma incidence, and male infertility associated with abnormal sperm motility, progression and morphology and increased IL-6 expression in the epididymis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    832
  • Tissues
    52
  • cDNA Data
    94
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000039804 Ensembl Gene Model | MGI Sequence Detail 34511 C57BL/6J ±  kb
    transcript ENSMUST00000040381 Ensembl | MGI Sequence Detail 3179 Not Applicable  
    polypeptide ENSMUSP00000046388 Ensembl | MGI Sequence Detail 579 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      6 Sequences
    • Protein Ontology
      PR:000011044 nuclear receptor coactivator 5
      (term hierarchy)
    • InterPro Domains
      IPR036621 Anticodon-binding domain superfamily
      IPR052600 Nuclear receptor coactivator/corepressor
    • GlyGen
      Q91W39 4 sites, 1 N-linked glycan (1 site), 1 O-linked glycan (3 sites)
    Molecular
    Reagents
    less
    • All nucleic 95
      cDNA 95

      Microarray probesets 3
    References
    more
    • Summaries
      All 37
      Developmental Gene Expression 2
      Gene Ontology 4
      Phenotypes 14
    • Earliest
      J:182418 Sauve F, et al., CIA, a novel estrogen receptor coactivator with a bifunctional nuclear receptor interacting determinant. Mol Cell Biol. 2001 Jan;21(1):343-53
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory