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Defb19 Gene Detail
Summary
  • Symbol
    Defb19
  • Name
    defensin beta 19
  • Synonyms
    Tdl
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385955
    NCBI Gene: 246700
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:152418006-152422232 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 75.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    184 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385955
 protein coding gene Chr2:152418006-152422232 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026669
 protein coding gene Chr2:157139557-157143627 (-)
A/J MGP_AJ_G0026635
 protein coding gene Chr2:150864814-150869812 (-)
AKR/J MGP_AKRJ_G0026605
 protein coding gene Chr2:155269985-155274210 (-)
BALB/cJ MGP_BALBcJ_G0026644
 protein coding gene Chr2:151175856-151180014 (-)
C3H/HeJ MGP_C3HHeJ_G0026387
 protein coding gene Chr2:155652115-155656939 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027093
 protein coding gene Chr2:161710441-161714487 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024464
 protein coding gene Chr2:144458892-144463146 (-)
CAST/EiJ MGP_CASTEiJ_G0025848
 protein coding gene Chr2:155896215-155901914 (-)
CBA/J MGP_CBAJ_G0026365
 protein coding gene Chr2:167641905-167646109 (-)
DBA/2J MGP_DBA2J_G0026501
 protein coding gene Chr2:150079492-150084193 (-)
FVB/NJ MGP_FVBNJ_G0026467
 protein coding gene Chr2:148534465-148538610 (-)
LP/J MGP_LPJ_G0026605
 protein coding gene Chr2:157289840-157293967 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026488
 protein coding gene Chr2:171749984-171754404 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027149
 protein coding gene Chr2:155155830-155160857 (-)
PWK/PhJ MGP_PWKPhJ_G0025582
 protein coding gene Chr2:149601196-149605764 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025385
 protein coding gene Chr2:154004345-154008588 (-)
WSB/EiJ MGP_WSBEiJ_G0025918
 protein coding gene Chr2:156071831-156076054 (-)



Homology
more
  • Human Ortholog
    DEFB119, defensin beta 119
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DEFB119, defensin beta 119
  • Synonyms
    DEFB120, DEFB-19, DEFB-20, DEFB20, ESC42-RELA, ESC42-RELB
  • Links
    NCBI Gene ID: 245932
    neXtProt AC: NX_Q8N690
    UniProt: Q8N690

  • Chr Location
    20q11.21; chr20:31377163-31390649 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with Defb19 mouse models

Human Disease Mouse Models
      
IDs
 View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit reduced female fertility due to reduced ability to attract sperm.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    814
  • Tissues
    50
  • cDNA Data
    12
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 246700 NCBI Gene Model | MGI Sequence Detail 4227 C57BL/6J ±  kb
    transcript NM_145157 RefSeq | MGI Sequence Detail 414 C57BL/6  
    polypeptide Q8K3I8 UniProt | EBI | MGI Sequence Detail 83 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 15
      cDNA 13
      Primer pair 2

      Microarray probesets 2
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 7
      Diseases 1
      Gene Ontology 3
      Phenotypes 8
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:332576 Li X, et al., beta-Defensin 19/119 mediates sperm chemotaxis and is associated with idiopathic infertility. Cell Rep Med. 2022 Dec 20;3(12):100825
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory