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Rps15a Gene Detail
Summary
  • Symbol
    Rps15a
  • Name
    ribosomal protein S15A
  • Synonyms
    A630031B11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2389091
    NCBI Gene: 267019
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:117703597-117715370 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 63.44 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    394 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2389091
 protein coding gene Chr7:117703595-117715411 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032894
 protein coding gene Chr7:121913304-121925091 (-)
A/J MGP_AJ_G0032877
 protein coding gene Chr7:118839955-118851772 (-)
AKR/J MGP_AKRJ_G0032809
 protein coding gene Chr7:121848727-121861579 (-)
BALB/cJ MGP_BALBcJ_G0032882
 protein coding gene Chr7:118562534-118574382 (-)
C3H/HeJ MGP_C3HHeJ_G0032592
 protein coding gene Chr7:121773084-121784863 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033388
 protein coding gene Chr7:126780818-126793460 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030360
 protein coding gene Chr7:120306748-120318762 (-)
CAST/EiJ MGP_CASTEiJ_G0031920
 protein coding gene Chr7:113504760-113516552 (-)
CBA/J MGP_CBAJ_G0032565
 protein coding gene Chr7:131004284-131016078 (-)
DBA/2J MGP_DBA2J_G0032717
 protein coding gene Chr7:116878631-116890437 (-)
FVB/NJ MGP_FVBNJ_G0032670
 protein coding gene Chr7:116718179-116730397 (-)
LP/J MGP_LPJ_G0032811
 protein coding gene Chr7:123392264-123404104 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032702
 protein coding gene Chr7:132537540-132551628 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033408
 protein coding gene Chr7:120848779-120861663 (-)
PWK/PhJ MGP_PWKPhJ_G0031628
 protein coding gene Chr7:109766874-109779073 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031475
 protein coding gene Chr7:107601261-107612988 (-)
WSB/EiJ MGP_WSBEiJ_G0032033
 protein coding gene Chr7:121736370-121750019 (-)



Homology
more
  • Human Ortholog
    RPS15A, ribosomal protein S15a
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPS15A, ribosomal protein S15a
  • Synonyms
    DBA20, S15a, uS8
  • Links
    NCBI Gene ID: 6210
    neXtProt AC: NX_P62244
    UniProt: P62244

  • Chr Location
    16p12.3; chr16:18781295-18790383 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RPS15A associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    31
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    410
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 267019 NCBI Gene Model | MGI Sequence Detail 11774 C57BL/6J ±  kb
transcript NM_170669 RefSeq | MGI Sequence Detail 5158 C57BL/6  
polypeptide P62245 UniProt | EBI | MGI Sequence Detail 130 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 411
    cDNA 411

    Microarray probesets 7
Other
Accession IDs
less
MGI:2441813
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 10
    Phenotypes 2
  • Earliest
    J:59379 Matsumoto K, et al., Cloning from insulinoma cells of synapsin I associated with insulin secretory granules. J Biol Chem. 1999 Jan 22;274(4):2053-9
  • Latest
    J:333015 Li H, et al., A male germ-cell-specific ribosome controls male fertility. Nature. 2022 Dec;612(7941):725-731
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory