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Irx3os Gene Detail
Summary
  • Symbol
    Irx3os
  • Name
    iroquois homeobox 3, opposite strand
  • Synonyms
    D230002A01Rik
Location &
Maps
more
  • Sequence Map
    Chr8:92527040-92534167 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 44.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2441953
 antisense lncRNA gene Chr8:92509225-92600347 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007363
 lincRNA gene Chr8:93058500-93068237 (+)
A/J MGP_AJ_G0007360
 lincRNA gene Chr8:89394764-89402957 (+)
AKR/J MGP_AKRJ_G0007332
 lincRNA gene Chr8:91922801-91929943 (+)
BALB/cJ MGP_BALBcJ_G0007338
 lincRNA gene Chr8:89562214-89569606 (+)
C3H/HeJ MGP_C3HHeJ_G0007282
 lincRNA gene Chr8:92616395-92623540 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007509
 lincRNA gene Chr8:96490634-96499336 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006702
 lincRNA gene Chr8:83343027-83350270 (+)
CAST/EiJ MGP_CASTEiJ_G0007184
 lincRNA gene Chr8:92144581-92151732 (+)
CBA/J MGP_CBAJ_G0007264
 lincRNA gene Chr8:99718230-99725455 (+)
DBA/2J MGP_DBA2J_G0007287
 lincRNA gene Chr8:88948311-88956164 (+)
FVB/NJ MGP_FVBNJ_G0007308
 lincRNA gene Chr8:87879455-87886692 (+)
LP/J MGP_LPJ_G0007368
 lincRNA gene Chr8:93181177-93191414 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007284
 lincRNA gene Chr8:102137067-102145894 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007511
 lincRNA gene Chr8:92021819-92028990 (+)
PWK/PhJ MGP_PWKPhJ_G0007125
 lincRNA gene Chr8:88280534-88288016 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007033
 lincRNA gene Chr8:90888615-90896976 (+)
WSB/EiJ MGP_WSBEiJ_G0007244
 lincRNA gene Chr8:92476538-92484556 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    736
  • Tissues
    4
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    5
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046413 Ensembl Gene Model | MGI Sequence Detail 7128 C57BL/6J ±  kb
transcript ENSMUST00000133337 Ensembl | MGI Sequence Detail 2993 Not Applicable  
polypeptide Q8BNB7 UniProt | EBI | MGI Sequence Detail 259 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Developmental Gene Expression 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/02/2024
MGI 6.13 		The Jackson Laboratory