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Rapgef4os3 Gene Detail
Summary
  • Symbol
    Rapgef4os3
  • Name
    Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 3
  • Synonyms
    4732447D17Rik
Location &
Maps
more
  • Sequence Map
    Chr2:72075309-72079319 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 43.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    156 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442080
 antisense lncRNA gene Chr2:72075309-72079319 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003584
 antisense lncRNA gene Chr2:72426533-72431746 (-)
A/J MGP_AJ_G0003566
 antisense lncRNA gene Chr2:69586117-69589819 (-)
AKR/J MGP_AKRJ_G0003544
 antisense lncRNA gene Chr2:71517490-71523833 (-)
BALB/cJ MGP_BALBcJ_G0003555
 antisense lncRNA gene Chr2:69789517-69794052 (-)
C3H/HeJ MGP_C3HHeJ_G0003502
 antisense lncRNA gene Chr2:71707817-71712567 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003693
 antisense lncRNA gene Chr2:74604462-74609453 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003202
 antisense lncRNA gene Chr2:66819998-66823608 (-)
CAST/EiJ MGP_CASTEiJ_G0003465
 antisense lncRNA gene Chr2:71914991-71918575 (-)
CBA/J MGP_CBAJ_G0003499
 antisense lncRNA gene Chr2:77343104-77346742 (-)
DBA/2J MGP_DBA2J_G0003507
 antisense lncRNA gene Chr2:69214733-69218400 (-)
FVB/NJ MGP_FVBNJ_G0003527
 antisense lncRNA gene Chr2:68623863-68627593 (-)
LP/J MGP_LPJ_G0003580
 antisense lncRNA gene Chr2:72312332-72315946 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003515
 antisense lncRNA gene Chr2:79304374-79308016 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003695
 antisense lncRNA gene Chr2:71593452-71598266 (-)
PWK/PhJ MGP_PWKPhJ_G0003420
 antisense lncRNA gene Chr2:69099896-69104075 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003364
 antisense lncRNA gene Chr2:71796712-71800328 (-)
WSB/EiJ MGP_WSBEiJ_G0003500
 antisense lncRNA gene Chr2:72044782-72049669 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    23
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086231 Ensembl Gene Model | MGI Sequence Detail 4011 C57BL/6J ±  kb
transcript ENSMUST00000132792 Ensembl | MGI Sequence Detail 3485 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 19
    Phenotypes 13
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:239094 Schep R, et al., Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape. Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7720-E7729
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory