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Syt15 Gene Detail
Summary
  • Symbol
    Syt15
  • Name
    synaptotagmin XV
  • Synonyms
    CHR10SYT, E230025K04Rik, sytXV
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442166
    NCBI Gene: 319508
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:33941915-33952378 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 20.80 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    448 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442166
 protein coding gene Chr14:33941552-33952378 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021169
 protein coding gene Chr14:27568125-27579083 (+)
A/J MGP_AJ_G0021117
 protein coding gene Chr14:26496851-26507675 (+)
AKR/J MGP_AKRJ_G0021094
 protein coding gene Chr14:27673711-27684537 (+)
BALB/cJ MGP_BALBcJ_G0021121
 protein coding gene Chr14:26679620-26690447 (+)
C3H/HeJ MGP_C3HHeJ_G0020904
 protein coding gene Chr14:27589759-27600631 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021553
 protein coding gene Chr14:28621248-28632081 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019115
 protein coding gene Chr14:26529270-26540305 (+)
CAST/EiJ MGP_CASTEiJ_G0020429
 protein coding gene Chr14:27407216-27452026 (+)
CBA/J MGP_CBAJ_G0020871
 protein coding gene Chr14:29649899-29660722 (+)
DBA/2J MGP_DBA2J_G0020993
 protein coding gene Chr14:26533297-26544205 (+)
FVB/NJ MGP_FVBNJ_G0020977
 protein coding gene Chr14:26493952-26504992 (+)
LP/J MGP_LPJ_G0021062
 protein coding gene Chr14:27902155-27913130 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021003
 protein coding gene Chr14:28804490-28815315 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021586
 protein coding gene Chr14:27508499-27519324 (+)
PWK/PhJ MGP_PWKPhJ_G0020177
 protein coding gene Chr14:26025298-26036256 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020001
 protein coding gene Chr14:27114418-27125326 (+)
WSB/EiJ MGP_WSBEiJ_G0020484
 protein coding gene Chr14:27563510-27574344 (+)



Homology
more
  • Human Ortholog
    SYT15, synaptotagmin 15
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SYT15, synaptotagmin 15
  • Synonyms
    CHR10SYT, SYT15B, sytXV
  • Links
    NCBI Gene ID: 83849
    neXtProt AC: NX_Q9BQS2
    UniProt: Q9BQS2, X6R8R1

  • Chr Location
    10q11.22; chr10:46578217-46597108 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    730
  • Tissues
    12
  • cDNA Data
    6
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319508 NCBI Gene Model | MGI Sequence Detail 10464 C57BL/6J ±  kb
transcript NM_181529 RefSeq | MGI Sequence Detail 3625 Not Specified  
polypeptide Q8C6N3 UniProt | EBI | MGI Sequence Detail 418 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 6
    Primer pair 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory