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Celf5 Gene Detail
Summary
  • Symbol
    Celf5
  • Name
    CUGBP, Elav-like family member 5
  • Synonyms
    4930565A21Rik, Brunol5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442333
    NCBI Gene: 319586
  • Alliance
    gene page
  • Transcription Start Sites
    16 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:81295061-81318543 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    434 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442333
 protein coding gene Chr10:81295061-81318564 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017560
 protein coding gene Chr10:82180418-82208504 (-)
A/J MGP_AJ_G0017538
 protein coding gene Chr10:79264646-79288133 (-)
AKR/J MGP_AKRJ_G0017499
 protein coding gene Chr10:81440694-81463760 (-)
BALB/cJ MGP_BALBcJ_G0017500
 protein coding gene Chr10:79486176-79511190 (-)
C3H/HeJ MGP_C3HHeJ_G0017323
 protein coding gene Chr10:81541819-81566900 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017954
 protein coding gene Chr10:85001585-85026663 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015643
 protein coding gene Chr10:75462765-75486646 (-)
CAST/EiJ MGP_CASTEiJ_G0016890
 protein coding gene Chr10:81781283-81807662 (-)
CBA/J MGP_CBAJ_G0017295
 protein coding gene Chr10:88330309-88361680 (-)
DBA/2J MGP_DBA2J_G0017401
 protein coding gene Chr10:78468961-78493395 (-)
FVB/NJ MGP_FVBNJ_G0017395
 protein coding gene Chr10:77725974-77753648 (-)
LP/J MGP_LPJ_G0017472
 protein coding gene Chr10:82625165-82654111 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017421
 protein coding gene Chr10:90164396-90189187 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017995
 protein coding gene Chr10:81450948-81476522 (-)
PWK/PhJ MGP_PWKPhJ_G0016671
 protein coding gene Chr10:78373676-78398313 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016461
 protein coding gene Chr10:80402468-80429451 (-)
WSB/EiJ MGP_WSBEiJ_G0016950
 protein coding gene Chr10:81493506-81522824 (-)



Homology
more
  • Human Ortholog
    CELF5, CUGBP Elav-like family member 5
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CELF5, CUGBP Elav-like family member 5
  • Synonyms
    BRUNOL-5, BRUNOL5, CELF-5
  • Links
    NCBI Gene ID: 60680
    neXtProt AC: NX_Q8N6W0
    UniProt: Q8N6W0

  • Chr Location
    19p13.3; chr19:3224661-3297076 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    25
  • cDNA Data
    10
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034818 Ensembl Gene Model | MGI Sequence Detail 23483 C57BL/6J ±  kb
transcript ENSMUST00000238823 Ensembl | MGI Sequence Detail 1477 Not Applicable  
polypeptide ENSMUSP00000158971 Ensembl | MGI Sequence Detail 446 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR034648 CELF-3/4/5/6, RNA recognition motif 1
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
less
  • All nucleic 11
    cDNA 10
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory