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9430053O09Rik Gene Detail
Summary
  • Symbol
    9430053O09Rik
  • Name
    RIKEN cDNA 9430053O09 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442604
    NCBI Gene: 102633149
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:77216137-77218916 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    138 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442604
 lncRNA gene Chr16:77190427-77219771 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000921
 unclassified gene Chr16:77534803-77537372 (-)
A/J MGP_AJ_G0000897
 unclassified gene Chr16:74113540-74116111 (-)
AKR/J MGP_AKRJ_G0000885
 unclassified gene Chr16:76345464-76348033 (-)
BALB/cJ MGP_BALBcJ_G0000890
 unclassified gene Chr16:74512823-74515392 (-)
C3H/HeJ MGP_C3HHeJ_G0000873
 unclassified gene Chr16:76799949-76802518 (-)
C57BL/6NJ MGP_C57BL6NJ_G0001005
 unclassified gene Chr16:80026252-80028821 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000738
 unclassified gene Chr16:72583766-72586353 (-)
CAST/EiJ MGP_CASTEiJ_G0000865
 unclassified gene Chr16:77199754-77202332 (-)
CBA/J MGP_CBAJ_G0000865
 unclassified gene Chr16:83443281-83445850 (-)
DBA/2J MGP_DBA2J_G0000869
 unclassified gene Chr16:73957472-73960043 (-)
FVB/NJ MGP_FVBNJ_G0000881
 unclassified gene Chr16:73320775-73323344 (-)
LP/J MGP_LPJ_G0000924
 unclassified gene Chr16:77279205-77281774 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000873
 unclassified gene Chr16:86589244-86591813 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000999
 unclassified gene Chr16:76678921-76681490 (-)
PWK/PhJ MGP_PWKPhJ_G0000819
 unclassified gene Chr16:74153068-74155637 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000792
 unclassified gene Chr16:76289174-76291748 (-)
WSB/EiJ MGP_WSBEiJ_G0000873
 unclassified gene Chr16:76890515-76893095 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    9
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102344 Ensembl Gene Model | MGI Sequence Detail 2780 C57BL/6J ±  kb
transcript AK034881 GenBank | ENA | DDBJ | MGI Sequence Detail 3380 C57BL/6J  
polypeptide Q3US56 UniProt | EBI | MGI Sequence Detail 88 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory