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Ammecr1l Gene Detail
Summary
  • Symbol
    Ammecr1l
  • Name
    AMME chromosomal region gene 1-like
  • Synonyms
    5430429D03Rik, E230022H04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442711
    NCBI Gene: 225339
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:31892879-31915796 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 17.84 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    406 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442711
 protein coding gene Chr18:31891457-31917136 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024216
 protein coding gene Chr18:29877022-29901065 (+)
A/J MGP_AJ_G0024181
 protein coding gene Chr18:28884805-28908810 (+)
AKR/J MGP_AKRJ_G0024150
 protein coding gene Chr18:29686294-29710312 (+)
BALB/cJ MGP_BALBcJ_G0024181
 protein coding gene Chr18:28977567-29003704 (+)
C3H/HeJ MGP_C3HHeJ_G0023949
 protein coding gene Chr18:29722181-29748119 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024623
 protein coding gene Chr18:30937608-30964076 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022065
 protein coding gene Chr18:29104864-29125196 (+)
CAST/EiJ MGP_CASTEiJ_G0023424
 protein coding gene Chr18:29612037-29638892 (+)
CBA/J MGP_CBAJ_G0023917
 protein coding gene Chr18:31894773-31920926 (+)
DBA/2J MGP_DBA2J_G0024049
 protein coding gene Chr18:28559879-28583522 (+)
FVB/NJ MGP_FVBNJ_G0024015
 protein coding gene Chr18:28264016-28287763 (+)
LP/J MGP_LPJ_G0024130
 protein coding gene Chr18:29958111-29982690 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024043
 protein coding gene Chr18:33255668-33279920 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024671
 protein coding gene Chr18:29550777-29574680 (+)
PWK/PhJ MGP_PWKPhJ_G0023167
 protein coding gene Chr18:28711994-28736538 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022976
 protein coding gene Chr18:29765612-29791140 (+)
WSB/EiJ MGP_WSBEiJ_G0023487
 protein coding gene Chr18:29450415-29475041 (+)



Homology
more
  • Human Ortholog
    AMMECR1L, AMMECR1 like
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    AMMECR1L, AMMECR1 like
  • Links
    NCBI Gene ID: 83607
    neXtProt AC: NX_Q6DCA0
    UniProt: Q6DCA0

  • Chr Location
    2q14.3; chr2:127861630-127885967 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    16
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041915 Ensembl Gene Model | MGI Sequence Detail 22918 C57BL/6J ±  kb
transcript ENSMUST00000234413 Ensembl | MGI Sequence Detail 3181 Not Applicable  
polypeptide ENSMUSP00000156982 Ensembl | MGI Sequence Detail 310 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 6
Other
Accession IDs
less
MGI:1918630, MGI:2147313, MGI:2147321, MGI:2147349
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory