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Plxna4os1 Gene Detail
Summary
  • Symbol
    Plxna4os1
  • Name
    plexin A4, opposite strand 1
  • Synonyms
    B230378P21Rik
Location &
Maps
more
  • Sequence Map
    Chr6:32488076-32492511 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 13.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    208 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442851
 antisense lncRNA gene Chr6:32488008-32492511 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004247
 antisense lncRNA gene Chr6:30511544-30516047 (+)
A/J MGP_AJ_G0004225
 antisense lncRNA gene Chr6:29193515-29198018 (+)
AKR/J MGP_AKRJ_G0004206
 antisense lncRNA gene Chr6:30180815-30185318 (+)
BALB/cJ MGP_BALBcJ_G0004212
 antisense lncRNA gene Chr6:29321817-29326320 (+)
C3H/HeJ MGP_C3HHeJ_G0004160
 antisense lncRNA gene Chr6:30163214-30167717 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004361
 antisense lncRNA gene Chr6:31308285-31312788 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003834
 antisense lncRNA gene Chr6:27340285-27344750 (+)
CAST/EiJ MGP_CASTEiJ_G0004122
 antisense lncRNA gene Chr6:29957632-29962144 (+)
CBA/J MGP_CBAJ_G0004154
 antisense lncRNA gene Chr6:32503232-32507735 (+)
DBA/2J MGP_DBA2J_G0004170
 antisense lncRNA gene Chr6:29092560-29097063 (+)
FVB/NJ MGP_FVBNJ_G0004186
 antisense lncRNA gene Chr6:28888825-28893354 (+)
LP/J MGP_LPJ_G0004248
 antisense lncRNA gene Chr6:30660264-30664767 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004176
 antisense lncRNA gene Chr6:34870912-34875415 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004358
 antisense lncRNA gene Chr6:30056255-30060758 (+)
PWK/PhJ MGP_PWKPhJ_G0004075
 antisense lncRNA gene Chr6:28682632-28687164 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004019
 antisense lncRNA gene Chr6:29757118-29761648 (+)
WSB/EiJ MGP_WSBEiJ_G0004158
 antisense lncRNA gene Chr6:29984287-29988790 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 319849 NCBI Gene Model | MGI Sequence Detail 4436 C57BL/6J ±  kb
transcript NR_040277 RefSeq | MGI Sequence Detail 1909 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory