About   Help   FAQ
D630039A03Rik Gene Detail
Summary
  • Symbol
    D630039A03Rik
  • Name
    RIKEN cDNA D630039A03 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442889
    NCBI Gene: 242484
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:57908483-57916297 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 31.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    308 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442889
 protein coding gene Chr4:57908384-57916297 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028320
 protein coding gene Chr4:56719728-56726871 (-)
A/J MGP_AJ_G0028281
 protein coding gene Chr4:54566484-54576370 (-)
AKR/J MGP_AKRJ_G0028230
 protein coding gene Chr4:56071885-56087757 (-)
BALB/cJ MGP_BALBcJ_G0028300
 protein coding gene Chr4:54728845-54736658 (-)
C3H/HeJ MGP_C3HHeJ_G0028021
 protein coding gene Chr4:56581332-56588255 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028741
 protein coding gene Chr4:58750592-58761693 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026047
 protein coding gene Chr4:51343500-51350183 (-)
CAST/EiJ MGP_CASTEiJ_G0027459
 protein coding gene Chr4:56312521-56320903 (-)
CBA/J MGP_CBAJ_G0027986
 protein coding gene Chr4:60741275-60748183 (-)
DBA/2J MGP_DBA2J_G0028136
 protein coding gene Chr4:54464535-54474740 (-)
FVB/NJ MGP_FVBNJ_G0028103
 protein coding gene Chr4:53691078-53699141 (-)
LP/J MGP_LPJ_G0028235
 protein coding gene Chr4:56833965-56840976 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028127
 protein coding gene Chr4:63876538-63884026 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028777
 protein coding gene Chr4:56277350-56284351 (-)
PWK/PhJ MGP_PWKPhJ_G0027184
 protein coding gene Chr4:54463264-54475435 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027012
 protein coding gene Chr4:55549394-55558361 (-)
WSB/EiJ MGP_WSBEiJ_G0027537
 protein coding gene Chr4:56226637-56235848 (-)



Homology
more
  • Human Ortholog
    C9orf152, chromosome 9 open reading frame 152
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C9orf152, chromosome 9 open reading frame 152
  • Synonyms
    bA470J20.2
  • Links
    NCBI Gene ID: 401546
    neXtProt AC: NX_Q5JTZ5
    UniProt: Q5JTZ5

  • Chr Location
    9q31.3; chr9:110190048-110208159 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    5
  • cDNA Data
    13
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052117 Ensembl Gene Model | MGI Sequence Detail 7815 C57BL/6J ±  kb
transcript ENSMUST00000063816 Ensembl | MGI Sequence Detail 2830 Not Applicable  
polypeptide ENSMUSP00000068932 Ensembl | MGI Sequence Detail 236 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR032738 TBC1 domain family member 30, C-terminal
Molecular
Reagents
less
  • All nucleic 14
    cDNA 13
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:189715 Chen H, et al., Identification of novel markers of mouse fetal ovary development. PLoS One. 2012;7(7):e41683
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory