About   Help   FAQ
C430042M11Rik Gene Detail
Summary
  • Symbol
    C430042M11Rik
  • Name
    RIKEN cDNA C430042M11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2443186
    NCBI Gene: 320021
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:84159104-84161847 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 54.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    303 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443186
 lncRNA gene Chr17:84159101-84161847 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005757
 lincRNA gene Chr17:86965280-86967890 (-)
A/J MGP_AJ_G0005744
 lincRNA gene Chr17:84229896-84233590 (-)
AKR/J MGP_AKRJ_G0005723
 lincRNA gene Chr17:85584671-85589166 (-)
BALB/cJ MGP_BALBcJ_G0005724
 lincRNA gene Chr17:84084974-84088018 (-)
C3H/HeJ MGP_C3HHeJ_G0005672
 lincRNA gene Chr17:86438036-86441329 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005884
 lincRNA gene Chr17:90080479-90083185 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005233
 lincRNA gene Chr17:79440354-79443165 (-)
CAST/EiJ MGP_CASTEiJ_G0005615
 lincRNA gene Chr17:87179680-87182409 (-)
CBA/J MGP_CBAJ_G0005660
 lincRNA gene Chr17:93790479-93795945 (-)
DBA/2J MGP_DBA2J_G0005678
 lincRNA gene Chr17:82717119-82721114 (-)
FVB/NJ MGP_FVBNJ_G0005704
 lincRNA gene Chr17:82194821-82197492 (-)
LP/J MGP_LPJ_G0005759
 lincRNA gene Chr17:87717893-87721919 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005689
 lincRNA gene Chr17:93924833-93927380 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005884
 lincRNA gene Chr17:86084289-86088056 (-)
PWK/PhJ MGP_PWKPhJ_G0005559
 lincRNA gene Chr17:82271531-82274431 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005476
 lincRNA gene Chr17:82859768-82862667 (-)
WSB/EiJ MGP_WSBEiJ_G0005666
 lincRNA gene Chr17:86933302-86935839 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097254 Ensembl Gene Model | MGI Sequence Detail 2744 C57BL/6J ±  kb
transcript ENSMUST00000180515 Ensembl | MGI Sequence Detail 1617 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6
References
more
  • Summaries
    All 9
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory