About   Help   FAQ
Harbi1 Gene Detail
Summary
  • Symbol
    Harbi1
  • Name
    harbinger transposase derived 1
  • Synonyms
    D230010M03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443194
    NCBI Gene: 241547
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:91541197-91551890 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 50.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    266 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443194
 protein coding gene Chr2:91541197-91554016 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026156
 protein coding gene Chr2:93074223-93084915 (+)
A/J MGP_AJ_G0026117
 protein coding gene Chr2:89331501-89342195 (+)
AKR/J MGP_AKRJ_G0026098
 protein coding gene Chr2:91798509-91809156 (+)
BALB/cJ MGP_BALBcJ_G0026126
 protein coding gene Chr2:89514631-89525375 (+)
C3H/HeJ MGP_C3HHeJ_G0025877
 protein coding gene Chr2:92088306-92100474 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026577
 protein coding gene Chr2:96314720-96325413 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023968
 protein coding gene Chr2:85832646-85846837 (+)
CAST/EiJ MGP_CASTEiJ_G0025342
 protein coding gene Chr2:92636997-92648374 (+)
CBA/J MGP_CBAJ_G0025855
 protein coding gene Chr2:99623315-99635432 (+)
DBA/2J MGP_DBA2J_G0025991
 protein coding gene Chr2:88933013-88944177 (+)
FVB/NJ MGP_FVBNJ_G0025954
 protein coding gene Chr2:88032684-88043410 (+)
LP/J MGP_LPJ_G0026095
 protein coding gene Chr2:93280571-93292434 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025980
 protein coding gene Chr2:102641648-102653622 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026631
 protein coding gene Chr2:91882174-91892873 (+)
PWK/PhJ MGP_PWKPhJ_G0025077
 protein coding gene Chr2:88670264-88681272 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024878
 protein coding gene Chr2:91451928-91466120 (+)
WSB/EiJ MGP_WSBEiJ_G0025409
 protein coding gene Chr2:92476123-92488041 (+)



Homology
more
  • Human Ortholog
    HARBI1, harbinger transposase derived 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HARBI1, harbinger transposase derived 1
  • Synonyms
    C11orf77
  • Links
    NCBI Gene ID: 283254
    neXtProt AC: NX_Q96MB7
    UniProt: Q96MB7

  • Chr Location
    11p11.2; chr11:46602861-46617909 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    26
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027243 Ensembl Gene Model | MGI Sequence Detail 10694 C57BL/6J ±  kb
transcript ENSMUST00000090608 Ensembl | MGI Sequence Detail 2308 Not Applicable  
polypeptide ENSMUSP00000088098 Ensembl | MGI Sequence Detail 349 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 2
References
more
  • Summaries
    All 34
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory