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B230354K17Rik Gene Detail
Summary
  • Symbol
    B230354K17Rik
  • Name
    RIKEN cDNA B230354K17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2443272
    NCBI Gene: 105246278
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:45744757-45753470 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 22.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    288 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443272
 lncRNA gene Chr17:45744524-45753470 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005735
 lincRNA gene Chr17:46438437-46448118 (+)
A/J MGP_AJ_G0005723
 lincRNA gene Chr17:45333889-45342398 (+)
AKR/J MGP_AKRJ_G0005702
 lincRNA gene Chr17:45636329-45646184 (+)
BALB/cJ MGP_BALBcJ_G0005703
 lincRNA gene Chr17:45223671-45232140 (+)
C3H/HeJ MGP_C3HHeJ_G0005651
 lincRNA gene Chr17:46349517-46357964 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005863
 lincRNA gene Chr17:48441610-48450672 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005214
 lincRNA gene Chr17:42131467-42140711 (+)
CAST/EiJ MGP_CASTEiJ_G0005593
 lincRNA gene Chr17:46443967-46452661 (+)
CBA/J MGP_CBAJ_G0005639
 lincRNA gene Chr17:50163623-50172093 (+)
DBA/2J MGP_DBA2J_G0005657
 lincRNA gene Chr17:44125798-44134196 (+)
FVB/NJ MGP_FVBNJ_G0005683
 lincRNA gene Chr17:43699250-43708690 (+)
LP/J MGP_LPJ_G0005738
 lincRNA gene Chr17:47089671-47098848 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005668
 lincRNA gene Chr17:49731007-49740333 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005863
 lincRNA gene Chr17:45997044-46005735 (+)
PWK/PhJ MGP_PWKPhJ_G0005537
 lincRNA gene Chr17:43428002-43436831 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005456
 lincRNA gene Chr17:42865977-42874636 (+)
WSB/EiJ MGP_WSBEiJ_G0005645
 lincRNA gene Chr17:46523196-46531642 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    772
  • Tissues
    13
  • cDNA Data
    19
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    37
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 105246278 NCBI Gene Model | MGI Sequence Detail 8714 C57BL/6J ±  kb
transcript NR_130960 RefSeq | MGI Sequence Detail 4918 C57BL/6  
polypeptide Q8BNK1 UniProt | EBI | MGI Sequence Detail 210 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR053270 Friend virus susceptibility protein 1
Molecular
Reagents
less
  • All nucleic 19
    cDNA 19

    Microarray probesets 4
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory