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Zscan22 Gene Detail
Summary
  • Symbol
    Zscan22
  • Name
    zinc finger and SCAN domain containing 22
  • Synonyms
    D530006B18Rik, Hkr2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443312
    NCBI Gene: 232878
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:12631742-12643010 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 7.68 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    502 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443312
 protein coding gene Chr7:12631736-12643010 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031655
 protein coding gene Chr7:10294732-10306968 (+)
A/J MGP_AJ_G0031628
 protein coding gene Chr7:10142194-10153525 (+)
AKR/J MGP_AKRJ_G0031551
 protein coding gene Chr7:10368184-10382864 (+)
BALB/cJ MGP_BALBcJ_G0031633
 protein coding gene Chr7:10247215-10258483 (+)
C3H/HeJ MGP_C3HHeJ_G0031355
 protein coding gene Chr7:10465180-10477412 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032097
 protein coding gene Chr7:10816760-10828028 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029191
 protein coding gene Chr7:11740886-11752101 (+)
CAST/EiJ MGP_CASTEiJ_G0030713
 protein coding gene Chr7:8023319-8034480 (+)
CBA/J MGP_CBAJ_G0031312
 protein coding gene Chr7:11033131-11046771 (+)
DBA/2J MGP_DBA2J_G0031470
 protein coding gene Chr7:10022623-10034068 (+)
FVB/NJ MGP_FVBNJ_G0031426
 protein coding gene Chr7:10019453-10030927 (+)
LP/J MGP_LPJ_G0031557
 protein coding gene Chr7:10382744-10399359 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031461
 protein coding gene Chr7:11120966-11132369 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032127
 protein coding gene Chr7:10147966-10162920 (+)
PWK/PhJ MGP_PWKPhJ_G0030441
 protein coding gene Chr7:8508735-8520886 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030267
 protein coding gene Chr7:6252812-6265121 (+)
WSB/EiJ MGP_WSBEiJ_G0030808
 protein coding gene Chr7:10172279-10183550 (+)



Homology
more
  • Human Ortholog
    ZSCAN22, zinc finger and SCAN domain containing 22
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZSCAN22, zinc finger and SCAN domain containing 22
  • Synonyms
    HKR2, ZNF50
  • Links
    NCBI Gene ID: 342945
    neXtProt AC: NX_P10073
    UniProt: P10073

  • Chr Location
    19q13.43; chr19:58326994-58342332 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    772
  • Tissues
    43
  • cDNA Data
    27
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054715 Ensembl Gene Model | MGI Sequence Detail 11269 C57BL/6J ±  kb
transcript ENSMUST00000055528 Ensembl | MGI Sequence Detail 2620 Not Applicable  
polypeptide ENSMUSP00000057651 Ensembl | MGI Sequence Detail 496 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 27

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142223
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory