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Olfm5 Gene Detail
Summary
  • Symbol
    Olfm5
  • Name
    olfactomedin 5
  • Synonyms
    E030002O03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443346
    NCBI Gene: 244180
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:103802220-103814023 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 54.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    458 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443346
 protein coding gene Chr7:103802220-103814038 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032705
 protein coding gene Chr7:107376544-107386961 (-)
A/J MGP_AJ_G0032680
 protein coding gene Chr7:104570647-104579946 (-)
AKR/J MGP_AKRJ_G0032613
 protein coding gene Chr7:107093361-107102100 (-)
BALB/cJ MGP_BALBcJ_G0032690
 protein coding gene Chr7:104298865-104307584 (-)
C3H/HeJ MGP_C3HHeJ_G0032401
 protein coding gene Chr7:107445283-107455892 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033186
 protein coding gene Chr7:111408171-111417712 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030181
 protein coding gene Chr7:106651746-106658292 (-)
CAST/EiJ MGP_CASTEiJ_G0031730
 protein coding gene Chr7:99087737-99095842 (-)
CBA/J MGP_CBAJ_G0032369
 protein coding gene Chr7:115339776-115355034 (-)
DBA/2J MGP_DBA2J_G0032523
 protein coding gene Chr7:102901004-102909953 (-)
FVB/NJ MGP_FVBNJ_G0032476
 protein coding gene Chr7:102611784-102620734 (-)
LP/J MGP_LPJ_G0032616
 protein coding gene Chr7:108704873-108713524 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032510
 protein coding gene Chr7:116734243-116743600 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033213
 protein coding gene Chr7:106289818-106299810 (-)
PWK/PhJ MGP_PWKPhJ_G0031444
 protein coding gene Chr7:95896355-95905072 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031289
 protein coding gene Chr7:93506332-93515272 (-)
WSB/EiJ MGP_WSBEiJ_G0031845
 protein coding gene Chr7:107024851-107034018 (-)



Homology
more
  • Human Ortholog
    OLFM5P, olfactomedin family member 5, pseudogene
  • Vertebrate Orthologs
    7
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OLFM5P, olfactomedin family member 5, pseudogene
  • Links
    NCBI Gene ID: 101927763

  • Chr Location
    chr11:5518310-5524955 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    35
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 244180 NCBI Gene Model | MGI Sequence Detail 11804 C57BL/6J ±  kb
transcript NM_172905 RefSeq | MGI Sequence Detail 2350 Not Specified  
polypeptide NP_766493 RefSeq | MGI Sequence Detail 496 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR003112 Olfactomedin-like domain
    IPR050605 Olfactomedin-like domain-containing protein
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 2
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory