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6430550D23Rik Gene Detail
Summary
  • Symbol
    6430550D23Rik
  • Name
    RIKEN cDNA 6430550D23 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443361
    NCBI Gene: 320095
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:155831465-155850315 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 77.26 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    621 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443361
 protein coding gene Chr2:155815199-155850315 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026751
 protein coding gene Chr2:160830595-160865751 (-)
A/J MGP_AJ_G0026717
 protein coding gene Chr2:154442479-154477895 (-)
AKR/J MGP_AKRJ_G0026688
 protein coding gene Chr2:158925115-158960018 (-)
BALB/cJ MGP_BALBcJ_G0026726
 protein coding gene Chr2:154738998-154774329 (-)
C3H/HeJ MGP_C3HHeJ_G0026469
 protein coding gene Chr2:159288304-159325364 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027175
 protein coding gene Chr2:165549866-165591660 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024545
 protein coding gene Chr2:147937059-147972657 (-)
CAST/EiJ MGP_CASTEiJ_G0025930
 protein coding gene Chr2:159611373-159647538 (-)
CBA/J MGP_CBAJ_G0026446
 protein coding gene Chr2:171557637-171597898 (-)
DBA/2J MGP_DBA2J_G0026583
 protein coding gene Chr2:153616452-153651173 (-)
FVB/NJ MGP_FVBNJ_G0026550
 protein coding gene Chr2:151994877-152031103 (-)
LP/J MGP_LPJ_G0026688
 protein coding gene Chr2:160971221-161007117 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026571
 protein coding gene Chr2:175528199-175565298 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027231
 protein coding gene Chr2:158802701-158843028 (-)
PWK/PhJ MGP_PWKPhJ_G0025664
 protein coding gene Chr2:153118332-153154961 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025467
 protein coding gene Chr2:157749324-157786385 (-)
WSB/EiJ MGP_WSBEiJ_G0026000
 protein coding gene Chr2:159691044-159727181 (-)



Homology
more
  • Human Ortholog
    C20orf173, chromosome 20 open reading frame 173
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C20orf173, chromosome 20 open reading frame 173
  • Synonyms
    dJ477O4.4
  • Links
    NCBI Gene ID: 140873
    neXtProt AC: NX_Q96LM9
    UniProt: Q96LM9

  • Chr Location
    20q11.22; chr20:35520741-35529652 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 320095 NCBI Gene Model | MGI Sequence Detail 18851 C57BL/6J ±  kb
transcript NM_001408013 RefSeq | MGI Sequence Detail 2855 C57BL/6  
polypeptide NP_001394941 RefSeq | MGI Sequence Detail 194 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR051757 Beta-galactoside alpha2-3 sialyltransferases
Molecular
Reagents
less
  • All nucleic 10
    Genomic 1
    cDNA 9

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Gene Ontology 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory