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A830018L16Rik Gene Detail
Summary
  • Symbol
    A830018L16Rik
  • Name
    RIKEN cDNA A830018L16 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444149
    NCBI Gene: 320492
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:11484329-12046125 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 2.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    19016 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444149
 protein coding gene Chr1:11484121-12046126 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015837
 protein coding gene Chr1:8722611-9265730 (+)
A/J MGP_AJ_G0015819
 protein coding gene Chr1:8743546-9274578 (+)
AKR/J MGP_AKRJ_G0015778
 protein coding gene Chr1:8635658-9178253 (+)
BALB/cJ MGP_BALBcJ_G0015775
 protein coding gene Chr1:8474787-8996523 (+)
C3H/HeJ MGP_C3HHeJ_G0015609
 protein coding gene Chr1:8565948-9132741 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016229
 protein coding gene Chr1:9102429-9705462 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013950
 protein coding gene Chr1:7501716-7990463 (+)
CAST/EiJ MGP_CASTEiJ_G0015189
 protein coding gene Chr1:8782610-9309294 (+)
CBA/J MGP_CBAJ_G0015582
 protein coding gene Chr1:9303316-9926265 (+)
DBA/2J MGP_DBA2J_G0015681
 protein coding gene Chr1:8362353-8903185 (+)
FVB/NJ MGP_FVBNJ_G0015686
 protein coding gene Chr1:8221383-8737033 (+)
LP/J MGP_LPJ_G0015753
 protein coding gene Chr1:8932059-9472349 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015705
 protein coding gene Chr1:9952941-10600740 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016276
 protein coding gene Chr1:8533243-9067020 (+)
PWK/PhJ MGP_PWKPhJ_G0014973
 protein coding gene Chr1:8198633-8717156 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014753
 protein coding gene Chr1:8722089-9283636 (+)
WSB/EiJ MGP_WSBEiJ_G0015253
 protein coding gene Chr1:8551435-9106500 (+)



Homology
more
  • Human Ortholog
    C8orf34, chromosome 8 open reading frame 34
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C8orf34, chromosome 8 open reading frame 34
  • Synonyms
    VEST-1, VEST1
  • Links
    NCBI Gene ID: 116328
    neXtProt AC: NX_Q49A92
    UniProt: Q49A92

  • Chr Location
    8q13.2; chr8:68330373-68819023 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057715 Ensembl Gene Model | MGI Sequence Detail 561797 C57BL/6J ±  kb
transcript ENSMUST00000137824 Ensembl | MGI Sequence Detail 1880 Not Applicable  
polypeptide ENSMUSP00000117421 Ensembl | MGI Sequence Detail 462 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory