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Slc35e2 Gene Detail
Summary
  • Symbol
    Slc35e2
  • Name
    solute carrier family 35, member E2
  • Synonyms
    A530082C11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444240
    NCBI Gene: 320541
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155685873-155707797 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 86.62 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    798 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444240
 protein coding gene Chr4:155685873-155707797 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029217
 protein coding gene Chr4:159944439-159969189 (+)
A/J MGP_AJ_G0029182
 protein coding gene Chr4:153221178-153244559 (+)
AKR/J MGP_AKRJ_G0029130
 protein coding gene Chr4:157384297-157408983 (+)
BALB/cJ MGP_BALBcJ_G0029198
 protein coding gene Chr4:153694404-153716755 (+)
C3H/HeJ MGP_C3HHeJ_G0028919
 protein coding gene Chr4:157933862-157956726 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029647
 protein coding gene Chr4:165628465-165653311 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026893
 protein coding gene Chr4:145511171-145537070 (+)
CAST/EiJ MGP_CASTEiJ_G0028332
 protein coding gene Chr4:155382795-155406863 (+)
CBA/J MGP_CBAJ_G0028881
 protein coding gene Chr4:170636110-170660372 (+)
DBA/2J MGP_DBA2J_G0029030
 protein coding gene Chr4:153240691-153264871 (+)
FVB/NJ MGP_FVBNJ_G0028994
 protein coding gene Chr4:152482685-152504355 (+)
LP/J MGP_LPJ_G0029120
 protein coding gene Chr4:159866099-159889451 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029021
 protein coding gene Chr4:173445810-173467271 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029679
 protein coding gene Chr4:158011277-158033383 (+)
PWK/PhJ MGP_PWKPhJ_G0028052
 protein coding gene Chr4:149381036-149402764 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027886
 protein coding gene Chr4:152271235-152295876 (+)
WSB/EiJ MGP_WSBEiJ_G0028412
 protein coding gene Chr4:158185962-158208275 (+)



Homology
more
  • Human Ortholog
    SLC35E2A, solute carrier family 35 member E2A (pseudogene)
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC35E2A, solute carrier family 35 member E2A (pseudogene)
  • Synonyms
    SLC35E2, SLC35E2AP, SLC35E2P
  • Links
    NCBI Gene ID: 9906
    neXtProt AC: NX_P0CK97
    UniProt: P0CK97

  • Chr Location
    1p36.33; chr1:1727385-1746070 (-)  GRCh38
  • Human Ortholog
    SLC35E2B, solute carrier family 35 member E2B
  • Synonyms
    SLC35E2
  • Links
    NCBI Gene ID: 728661
    neXtProt AC: NX_P0CK96
    UniProt: P0CK96

  • Chr Location
    1p36.33; chr1:1659529-1692795 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    727
  • Tissues
    19
  • cDNA Data
    13
  • Literature Summary
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 320541 NCBI Gene Model | MGI Sequence Detail 21925 C57BL/6J ±  kb
transcript NM_177186 RefSeq | MGI Sequence Detail 6333 C57BL/6  
polypeptide Q8C811 UniProt | EBI | MGI Sequence Detail 405 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    Genomic 1
    cDNA 13
    Primer pair 2

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140406
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory