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Svopl Gene Detail
Summary
  • Symbol
    Svopl
  • Name
    SV2 related protein homolog (rat)-like
  • Synonyms
    9430071P14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444335
    NCBI Gene: 320590
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:37960674-38023931 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 17.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1949 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444335
 protein coding gene Chr6:37960674-38023944 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030579
 protein coding gene Chr6:36249101-36315237 (-)
A/J MGP_AJ_G0030552
 protein coding gene Chr6:34687146-34752792 (-)
AKR/J MGP_AKRJ_G0030479
 protein coding gene Chr6:35792461-35859501 (-)
BALB/cJ MGP_BALBcJ_G0030562
 protein coding gene Chr6:34879006-34942500 (-)
C3H/HeJ MGP_C3HHeJ_G0030275
 protein coding gene Chr6:35798393-35863808 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031016
 protein coding gene Chr6:37168773-37232941 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028228
 protein coding gene Chr6:32602572-32667565 (-)
CAST/EiJ MGP_CASTEiJ_G0029677
 protein coding gene Chr6:35682245-35752797 (-)
CBA/J MGP_CBAJ_G0030253
 protein coding gene Chr6:38592755-38658959 (-)
DBA/2J MGP_DBA2J_G0030397
 protein coding gene Chr6:34508646-34573005 (-)
FVB/NJ MGP_FVBNJ_G0030351
 protein coding gene Chr6:34297858-34361167 (-)
LP/J MGP_LPJ_G0030484
 protein coding gene Chr6:36311081-36375090 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030387
 protein coding gene Chr6:40978395-41041940 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031046
 protein coding gene Chr6:35710354-35776205 (-)
PWK/PhJ MGP_PWKPhJ_G0029391
 protein coding gene Chr6:34151770-34220620 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029227
 protein coding gene Chr6:35431165-35501167 (-)
WSB/EiJ MGP_WSBEiJ_G0029753
 protein coding gene Chr6:35657067-35721514 (-)



Homology
more
  • Human Ortholog
    SVOPL, SVOP like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SVOPL, SVOP like
  • Synonyms
    SLC22B5
  • Links
    NCBI Gene ID: 136306
    neXtProt AC: NX_Q8N434
    UniProt: Q8N434

  • Chr Location
    7q34; chr7:138594285-138701362 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    773
  • Tissues
    50
  • cDNA Data
    10
  • Literature Summary
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029830 Ensembl Gene Model | MGI Sequence Detail 63258 C57BL/6J ±  kb
transcript ENSMUST00000096040 Ensembl | MGI Sequence Detail 2366 Not Applicable  
polypeptide ENSMUSP00000093743 Ensembl | MGI Sequence Detail 494 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 29
    Developmental Gene Expression 6
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory