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Slc35f3 Gene Detail
Summary
  • Symbol
    Slc35f3
  • Name
    solute carrier family 35, member F3
  • Synonyms
    B230375D17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444426
    NCBI Gene: 210027
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:126865734-127122717 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 73.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8218 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444426
 protein coding gene Chr8:126865155-127122726 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034292
 protein coding gene Chr8:130119502-130224186 (+)
A/J MGP_AJ_G0034272
 protein coding gene Chr8:124715890-124814130 (+)
AKR/J MGP_AKRJ_G0034199
 protein coding gene Chr8:128295470-128399158 (+)
BALB/cJ MGP_BALBcJ_G0034265
 protein coding gene Chr8:124879384-124976986 (+)
C3H/HeJ MGP_C3HHeJ_G0033976
 protein coding gene Chr8:128947300-129049050 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034785
 protein coding gene Chr8:134428087-134537063 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031726
 protein coding gene Chr8:117415376-117511740 (+)
CAST/EiJ MGP_CASTEiJ_G0033303
 protein coding gene Chr8:129101168-129205704 (+)
CBA/J MGP_CBAJ_G0033949
 protein coding gene Chr8:139413402-139526758 (+)
DBA/2J MGP_DBA2J_G0034105
 protein coding gene Chr8:123850890-123948528 (+)
FVB/NJ MGP_FVBNJ_G0034049
 protein coding gene Chr8:123061153-123160916 (+)
LP/J MGP_LPJ_G0034194
 protein coding gene Chr8:130269327-130375374 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034096
 protein coding gene Chr8:141349979-141455220 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034804
 protein coding gene Chr8:128538227-128642764 (+)
PWK/PhJ MGP_PWKPhJ_G0033005
 protein coding gene Chr8:123644524-123720976 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032844
 protein coding gene Chr8:127161289-127267662 (+)
WSB/EiJ MGP_WSBEiJ_G0033420
 protein coding gene Chr8:129278541-129381427 (+)



Homology
more
  • Human Ortholog
    SLC35F3, solute carrier family 35 member F3
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC35F3, solute carrier family 35 member F3
  • Links
    NCBI Gene ID: 148641
    neXtProt AC: NX_Q8IY50
    UniProt: Q8IY50

  • Chr Location
    1q42.2; chr1:233904676-234324511 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    8
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057060 Ensembl Gene Model | MGI Sequence Detail 256984 C57BL/6J ±  kb
transcript ENSMUST00000238518 Ensembl | MGI Sequence Detail 2912 Not Applicable  
polypeptide ENSMUSP00000158727 Ensembl | MGI Sequence Detail 490 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory