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Fam171b Gene Detail
Summary
  • Symbol
    Fam171b
  • Name
    family with sequence similarity 171, member B
  • Synonyms
    D430039N05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444579
    NCBI Gene: 241520
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:83642980-83713830 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1812 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444579
 protein coding gene Chr2:83642889-83713878 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025893
 protein coding gene Chr2:84474873-84553495 (+)
A/J MGP_AJ_G0025870
 protein coding gene Chr2:81247265-81317021 (+)
AKR/J MGP_AKRJ_G0025839
 protein coding gene Chr2:83331278-83403295 (+)
BALB/cJ MGP_BALBcJ_G0025866
 protein coding gene Chr2:81367458-81433622 (+)
C3H/HeJ MGP_C3HHeJ_G0025625
 protein coding gene Chr2:83606707-83671690 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026312
 protein coding gene Chr2:87049533-87120012 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023715
 protein coding gene Chr2:78150135-78205888 (+)
CAST/EiJ MGP_CASTEiJ_G0025087
 protein coding gene Chr2:84069070-84132157 (+)
CBA/J MGP_CBAJ_G0025606
 protein coding gene Chr2:90240465-90306615 (+)
DBA/2J MGP_DBA2J_G0025737
 protein coding gene Chr2:80819667-80886615 (+)
FVB/NJ MGP_FVBNJ_G0025699
 protein coding gene Chr2:80041188-80105365 (+)
LP/J MGP_LPJ_G0025825
 protein coding gene Chr2:84326205-84400257 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025730
 protein coding gene Chr2:92457955-92531059 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026368
 protein coding gene Chr2:83540997-83606179 (+)
PWK/PhJ MGP_PWKPhJ_G0024830
 protein coding gene Chr2:80603710-80666341 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024635
 protein coding gene Chr2:83675575-83756013 (+)
WSB/EiJ MGP_WSBEiJ_G0025156
 protein coding gene Chr2:84197027-84264023 (+)



Homology
more
  • Human Ortholog
    FAM171B, family with sequence similarity 171 member B
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM171B, family with sequence similarity 171 member B
  • Synonyms
    KIAA1946
  • Links
    NCBI Gene ID: 165215
    neXtProt AC: NX_Q6P995
    UniProt: Q6P995

  • Chr Location
    2q32.1; chr2:186694060-186765959 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    809
  • Tissues
    39
  • cDNA Data
    12
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048388 Ensembl Gene Model | MGI Sequence Detail 70851 C57BL/6J ±  kb
transcript ENSMUST00000051454 Ensembl | MGI Sequence Detail 5614 Not Applicable  
polypeptide ENSMUSP00000062702 Ensembl | MGI Sequence Detail 821 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 6
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:317350 O'Neil SD, et al., Action potential-coupled Rho GTPase signaling drives presynaptic plasticity. Elife. 2021 Jul 16;10:e63756
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory