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6030443J06Rik Gene Detail
Summary
  • Symbol
    6030443J06Rik
  • Name
    RIKEN cDNA 6030443J06 gene
  • Synonyms
    1700030G06Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444595
    NCBI Gene: 320719
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:22755411-22763169 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 10.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    404 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444595
 lncRNA gene Chr5:22755389-23012848 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006586
 lincRNA gene Chr5:20114564-20379462 (+)
A/J MGP_AJ_G0006579
 lincRNA gene Chr5:19486503-19740749 (+)
AKR/J MGP_AKRJ_G0006550
 lincRNA gene Chr5:20233669-20500527 (+)
BALB/cJ MGP_BALBcJ_G0006554
 lincRNA gene Chr5:19921777-20203747 (+)
C3H/HeJ MGP_C3HHeJ_G0006501
 lincRNA gene Chr5:20311973-20591213 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006718
 lincRNA gene Chr5:21574274-22439924 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005989
 lincRNA gene Chr5:17740449-17742923 (+)
CAST/EiJ MGP_CASTEiJ_G0006428
 lincRNA gene Chr5:19620985-19887738 (+)
CBA/J MGP_CBAJ_G0006484
 lincRNA gene Chr5:21840485-22160513 (+)
DBA/2J MGP_DBA2J_G0006504
 lincRNA gene Chr5:19763028-20024866 (+)
FVB/NJ MGP_FVBNJ_G0006528
 lincRNA gene Chr5:19167303-19425501 (+)
LP/J MGP_LPJ_G0006587
 lincRNA gene Chr5:20527898-20787018 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006512
 lincRNA gene Chr5:23078671-23367357 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006724
 lincRNA gene Chr5:19830899-20096389 (+)
PWK/PhJ MGP_PWKPhJ_G0006366
 lincRNA gene Chr5:18804104-19057528 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006277
 lincRNA gene Chr5:19235308-19495312 (+)
WSB/EiJ MGP_WSBEiJ_G0006478
 lincRNA gene Chr5:19926908-20195260 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Gene trapped
    6
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving 6030443J06Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    41
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 320719 NCBI Gene Model | MGI Sequence Detail 7759 C57BL/6J ±  kb
transcript NR_102315 RefSeq | MGI Sequence Detail 4325 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
Other
Accession IDs
less
MGI:1916757
References
more
  • Summaries
    All 22
    Diseases 1
    Phenotypes 12
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory