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5330437M03Rik Gene Detail
Summary
  • Symbol
    5330437M03Rik
  • Name
    RIKEN cDNA 5330437M03 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444650
    NCBI Gene: 320746
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:21681300-21685382 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    179 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444650
 lncRNA gene Chr6:21681300-21685382 (+)
129S1/SvImJ MGP_129S1SvImJ_G0001866
 unclassified gene Chr6:19142112-19146190 (+)
A/J MGP_AJ_G0001843
 unclassified gene Chr6:18358018-18362096 (+)
AKR/J MGP_AKRJ_G0001830
 unclassified gene Chr6:18913731-18917809 (+)
BALB/cJ MGP_BALBcJ_G0001840
 unclassified gene Chr6:18436925-18441003 (+)
C3H/HeJ MGP_C3HHeJ_G0001817
 unclassified gene Chr6:18889366-18893444 (+)
C57BL/6NJ MGP_C57BL6NJ_G0001962
 unclassified gene Chr6:19732304-19736383 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0001619
 unclassified gene Chr6:16992226-16996307 (+)
CAST/EiJ MGP_CASTEiJ_G0001786
 unclassified gene Chr6:18826794-18830868 (+)
CBA/J MGP_CBAJ_G0001810
 unclassified gene Chr6:20383263-20389210 (+)
DBA/2J MGP_DBA2J_G0001814
 unclassified gene Chr6:18268346-18272424 (+)
FVB/NJ MGP_FVBNJ_G0001822
 unclassified gene Chr6:18059228-18063306 (+)
LP/J MGP_LPJ_G0001869
 unclassified gene Chr6:19241382-19245460 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0001802
 unclassified gene Chr6:22206666-22210707 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0001951
 unclassified gene Chr6:18893052-18897130 (+)
PWK/PhJ MGP_PWKPhJ_G0001747
 unclassified gene Chr6:17939727-17943909 (+)
SPRET/EiJ MGP_SPRETEiJ_G0001712
 unclassified gene Chr6:18652177-18656272 (+)
WSB/EiJ MGP_WSBEiJ_G0001810
 unclassified gene Chr6:18773363-18777445 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106855 Ensembl Gene Model | MGI Sequence Detail 4083 C57BL/6J ±  kb
transcript AK042949 GenBank | ENA | DDBJ | MGI Sequence Detail 4090 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory