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A730020E08Rik Gene Detail
Summary
  • Symbol
    A730020E08Rik
  • Name
    RIKEN cDNA A730020E08 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444999
    NCBI Gene: 100504262
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:61152588-61157794 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 29.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    206 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444999
 lncRNA gene Chr6:61149277-61157794 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004757
 bidirectional promoter lncRNA gene Chr6:60921055-60929601 (-)
A/J MGP_AJ_G0004738
 bidirectional promoter lncRNA gene Chr6:58260152-58268671 (-)
AKR/J MGP_AKRJ_G0004718
 bidirectional promoter lncRNA gene Chr6:60188993-60197499 (-)
BALB/cJ MGP_BALBcJ_G0004720
 bidirectional promoter lncRNA gene Chr6:58666873-58675383 (-)
C3H/HeJ MGP_C3HHeJ_G0004668
 bidirectional promoter lncRNA gene Chr6:60221915-60230419 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004870
 bidirectional promoter lncRNA gene Chr6:62317625-62326134 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004309
 bidirectional promoter lncRNA gene Chr6:55805900-55814414 (-)
CAST/EiJ MGP_CASTEiJ_G0004622
 bidirectional promoter lncRNA gene Chr6:60296892-60307331 (-)
CBA/J MGP_CBAJ_G0004661
 bidirectional promoter lncRNA gene Chr6:64861501-64870009 (-)
DBA/2J MGP_DBA2J_G0004679
 bidirectional promoter lncRNA gene Chr6:57985933-57994490 (-)
FVB/NJ MGP_FVBNJ_G0004698
 bidirectional promoter lncRNA gene Chr6:57535360-57544891 (-)
LP/J MGP_LPJ_G0004758
 bidirectional promoter lncRNA gene Chr6:60872968-60881517 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004683
 bidirectional promoter lncRNA gene Chr6:67823649-67832153 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004873
 bidirectional promoter lncRNA gene Chr6:60088568-60097108 (-)
PWK/PhJ MGP_PWKPhJ_G0004575
 bidirectional promoter lncRNA gene Chr6:57158018-57166847 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004508
 bidirectional promoter lncRNA gene Chr6:59551412-59560049 (-)
WSB/EiJ MGP_WSBEiJ_G0004667
 bidirectional promoter lncRNA gene Chr6:60384791-60393335 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100504262 NCBI Gene Model | MGI Sequence Detail 5207 C57BL/6J ±  kb
transcript NR_040287 RefSeq | MGI Sequence Detail 1661 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory