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Rtp3 Gene Detail
Summary
  • Symbol
    Rtp3
  • Name
    receptor transporter protein 3
  • Synonyms
    Tmem7
  • Feature Type
    protein coding gene
  • IDs
    MGI:2446841
    NCBI Gene: 235636
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:110814003-110818781 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 60.79 cM, cytoband F
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    228 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2446841
 protein coding gene Chr9:110814003-110819651 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035367
 protein coding gene Chr9:113180106-113185770 (-)
A/J MGP_AJ_G0035348
 protein coding gene Chr9:109051281-109057434 (-)
AKR/J MGP_AKRJ_G0035279
 protein coding gene Chr9:111757765-111766603 (-)
BALB/cJ MGP_BALBcJ_G0035343
 protein coding gene Chr9:108804287-108809604 (-)
C3H/HeJ MGP_C3HHeJ_G0035051
 protein coding gene Chr9:112270603-112276581 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035865
 protein coding gene Chr9:116300046-116307496 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032751
 protein coding gene Chr9:106264555-106270255 (-)
CAST/EiJ MGP_CASTEiJ_G0034357
 protein coding gene Chr9:112073813-112080041 (-)
CBA/J MGP_CBAJ_G0035018
 protein coding gene Chr9:120578676-120583919 (-)
DBA/2J MGP_DBA2J_G0035177
 protein coding gene Chr9:108506211-108513209 (-)
FVB/NJ MGP_FVBNJ_G0035124
 protein coding gene Chr9:107349505-107357100 (-)
LP/J MGP_LPJ_G0035256
 protein coding gene Chr9:113468863-113475023 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035164
 protein coding gene Chr9:121895076-121903001 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035885
 protein coding gene Chr9:112114175-112123072 (-)
PWK/PhJ MGP_PWKPhJ_G0034064
 protein coding gene Chr9:108752563-108758149 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033899
 protein coding gene Chr9:112201336-112210567 (-)
WSB/EiJ MGP_WSBEiJ_G0034478
 protein coding gene Chr9:111983233-111989594 (-)



Homology
more
  • Human Ortholog
    RTP3, receptor transporter protein 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RTP3, receptor transporter protein 3
  • Synonyms
    LTM1, TMEM7, Z3CXXC3
  • Links
    NCBI Gene ID: 83597
    neXtProt AC: NX_Q9BQQ7
    UniProt: Q9BQQ7

  • Chr Location
    3p21.31; chr3:46494611-46500950 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235636 NCBI Gene Model | MGI Sequence Detail 4779 C57BL/6J ±  kb
transcript NM_153100 RefSeq | MGI Sequence Detail 2460 C57BL/6  
polypeptide Q5QGU6 UniProt | EBI | MGI Sequence Detail 474 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR026096 Receptor-transporting protein
    IPR027377 ZAR1/RTP1-5-like, 3CxxC-type zinc finger
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:80594 Kiss H, et al., Comparative human/murine sequence analysis of the common eliminated region 1 from human 3p21.3. Mamm Genome. 2002 Nov;13(11):646-55
  • Latest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory