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H2bc22 Gene Detail
Summary
  • Symbol
    H2bc22
  • Name
    H2B clustered histone 22
  • Synonyms
    Hist1h2bp
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448409
    NCBI Gene: 319188
  • Member of
    Hist1 cluster
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:21971631-21973383 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 7.97 cM, cytoband A2-A3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    157 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448409
 protein coding gene Chr13:21971631-21985731 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020301
 protein coding gene Chr13:19067214-19366760 (+)
A/J MGP_AJ_G0020256
 protein coding gene Chr13:18645221-18646973 (+)
AKR/J MGP_AKRJ_G0020228
 protein coding gene Chr13:18960721-18963061 (+)
BALB/cJ MGP_BALBcJ_G0020243
 protein coding gene Chr13:18700639-18702391 (+)
C3H/HeJ MGP_C3HHeJ_G0020053
 protein coding gene Chr13:19050112-19051864 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020684
 protein coding gene Chr13:19745598-19750928 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019587
 protein coding gene Chr13:19136758-19137400 (+)
CBA/J MGP_CBAJ_G0020007
 protein coding gene Chr13:20420796-20422548 (+)
DBA/2J MGP_DBA2J_G0020130
 protein coding gene Chr13:18275146-18276898 (+)
FVB/NJ MGP_FVBNJ_G0020116
 protein coding gene Chr13:17935646-17937291 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020148
 protein coding gene Chr13:20811850-20813528 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020716
 protein coding gene Chr13:18771458-18773210 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0019146
 protein coding gene Chr13:17717053-17771039 (+)
WSB/EiJ MGP_WSBEiJ_G0019638
 protein coding gene Chr13:18860009-18861867 (+)



Homology
more
  • Human Ortholog
    H2BC17, H2B clustered histone 17
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H2BC17, H2B clustered histone 17
  • Synonyms
    dJ193B12.2, H2B.2, H2BFN, H2B/n, HIST1H2BO
  • Links
    NCBI Gene ID: 8348
    neXtProt AC: NX_P23527
    UniProt: P23527

  • Chr Location
    6p22.1; chr6:27893425-27893891 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    1
  • Gene trapped
    5
  • Radiation induced
    1
  • Genomic Mutations
    2 involving H2bc22
  • Find Mice (IMSR)
    7 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    11
  • cDNA Data
    12
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000069308 Ensembl Gene Model | MGI Sequence Detail 1753 C57BL/6J ±  kb
transcript ENSMUST00000110473 Ensembl | MGI Sequence Detail 621 Not Applicable  
polypeptide ENSMUSP00000106099 Ensembl | MGI Sequence Detail 138 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    Genomic 1
    cDNA 12
    Other 3

    Microarray probesets 4
Other
Accession IDs
less
MGI:6384992
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory