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Nutm1 Gene Detail
Summary
  • Symbol
    Nutm1
  • Name
    NUT midline carcinoma, family member 1
  • Synonyms
    BC125332, Nut
  • Feature Type
    protein coding gene
  • IDs
    MGI:2661384
    NCBI Gene: 213765
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:112078293-112089636 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 56.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    260 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2661384
 protein coding gene Chr2:112078293-112089636 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026285
 protein coding gene Chr2:114691020-114702967 (-)
A/J MGP_AJ_G0026246
 protein coding gene Chr2:109992454-110003836 (-)
AKR/J MGP_AKRJ_G0026225
 protein coding gene Chr2:113079837-113091509 (-)
BALB/cJ MGP_BALBcJ_G0026259
 protein coding gene Chr2:110259832-110271150 (-)
C3H/HeJ MGP_C3HHeJ_G0026004
 protein coding gene Chr2:113475586-113487733 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026706
 protein coding gene Chr2:118493717-118505048 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024086
 protein coding gene Chr2:105225148-105236594 (-)
CAST/EiJ MGP_CASTEiJ_G0025468
 protein coding gene Chr2:113750463-113767842 (-)
CBA/J MGP_CBAJ_G0025981
 protein coding gene Chr2:122626007-122637341 (-)
DBA/2J MGP_DBA2J_G0026120
 protein coding gene Chr2:109448460-109459753 (-)
FVB/NJ MGP_FVBNJ_G0026082
 protein coding gene Chr2:108336155-108347421 (-)
LP/J MGP_LPJ_G0026221
 protein coding gene Chr2:114972595-114984806 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026101
 protein coding gene Chr2:127028234-127040202 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026761
 protein coding gene Chr2:113149960-113161291 (-)
PWK/PhJ MGP_PWKPhJ_G0025203
 protein coding gene Chr2:108956254-108968394 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025002
 protein coding gene Chr2:112338462-112349912 (-)
WSB/EiJ MGP_WSBEiJ_G0025536
 protein coding gene Chr2:113957528-113970110 (-)



Homology
more
  • Human Ortholog
    NUTM1, NUT midline carcinoma family member 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NUTM1, NUT midline carcinoma family member 1
  • Synonyms
    C15orf55, FAM22H, NUT
  • Links
    NCBI Gene ID: 256646
    neXtProt AC: NX_Q86Y26
    UniProt: Q86Y26

  • Chr Location
    15q14; chr15:34343315-34357737 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotypes from 2 alleles in 2 genetic backgrounds
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit male infertility, azoospermia, small testes, and arrest of spermatogenesis with impaired H4 histone acetylation in spermatids.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 213765 NCBI Gene Model | MGI Sequence Detail 11344 C57BL/6J ±  kb
    transcript NM_172521 RefSeq | MGI Sequence Detail 3731 C57BL/6  
    polypeptide Q8BHP2 UniProt | EBI | MGI Sequence Detail 1126 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 8
      cDNA 8

      Microarray probesets 2
    References
    more
    • Summaries
      All 32
      Developmental Gene Expression 1
      Gene Ontology 1
      Phenotypes 11
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:347978 Zheng D, et al., Brd4::Nutm1 fusion gene initiates NUT carcinoma in vivo. Life Sci Alliance. 2024 Jul;7(7)
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory