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Tpt1-ps3 Pseudogene Detail
Summary
  • Symbol
    Tpt1-ps3
  • Name
    tumor protein, translationally-controlled, pseudogene 3
  • Synonyms
    Gm14456
  • Feature Type
    pseudogene
  • IDs
    MGI:2664997
    NCBI Gene: 100043703
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:99854777-99855295 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 46.41 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    135 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2664997
 pseudogene Chr6:99854572-99855394 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014662
 pseudogene ChrX:98313234-98313740 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0014596
 pseudogene ChrX:101128534-101129040 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0014549
 pseudogene Chr9:36840480-36843256 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0014001
 pseudogene Chr9:34791131-34791787 (+)
FVB/NJ MGP_FVBNJ_G0014000
 pseudogene Chr9:34048494-34049309 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0015068
 pseudogene ChrX:97986011-97986517 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0013677
 pseudogene ChrX:83926140-83926662 (+)
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    12
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084319 Ensembl Gene Model | MGI Sequence Detail 519 C57BL/6J ±  kb
transcript ENSMUST00000121046 Ensembl | MGI Sequence Detail 519 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3650388
References
more
  • Summaries
    All 7
  • Earliest
    J:83803 Fiucci G, et al., Genomic organization and expression of mouse Tpt1 gene. Genomics. 2003 Jun;81(6):570-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory