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Tpt1-ps5 Pseudogene Detail
Summary
  • Symbol
    Tpt1-ps5
  • Name
    tumor protein, translationally-controlled, pseudogene 5
  • Synonyms
    Gm6790
  • Feature Type
    pseudogene
  • IDs
    MGI:2664999
    NCBI Gene: 627798
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:37607811-37608326 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.80 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    163 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2664999
 pseudogene Chr9:37607702-37608537 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014136
 pseudogene Chr9:35706488-35706983 (+)
A/J MGP_AJ_G0014670
 pseudogene ChrX:98290025-98290531 (+)
AKR/J MGP_AKRJ_G0014078
 pseudogene Chr9:35509628-35510316 (+)
BALB/cJ MGP_BALBcJ_G0014618
 pseudogene ChrX:97035391-97035897 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0014077
 pseudogene ChrX:83003476-83003982 (+)
CBA/J MGP_CBAJ_G0014440
 pseudogene ChrX:104364017-104364516 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0014001
 pseudogene Chr9:34048494-34049309 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0014548
 pseudogene ChrX:108896164-108896670 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014521
 pseudogene Chr9:35448580-35449098 (+)
PWK/PhJ MGP_PWKPhJ_G0013884
 pseudogene ChrX:80606656-80607252 (+)
SPRET/EiJ MGP_SPRETEiJ_G0013193
 pseudogene Chr9:35652120-35652638 (+)
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059252 Ensembl Gene Model | MGI Sequence Detail 516 C57BL/6J ±  kb
transcript ENSMUST00000112150 Ensembl | MGI Sequence Detail 516 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3643577
References
more
  • Summaries
    All 6
  • Earliest
    J:83803 Fiucci G, et al., Genomic organization and expression of mouse Tpt1 gene. Genomics. 2003 Jun;81(6):570-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory