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Fmr1nb Gene Detail
Summary
  • Symbol
    Fmr1nb
  • Name
    Fmr1 neighbor
  • Synonyms
    3830422N12Rik, NY-SAR-35, NYSAR35
  • Feature Type
    protein coding gene
  • IDs
    MGI:2672032
    NCBI Gene: 207854
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:67805460-67848167 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 34.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    879 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2672032
 protein coding gene ChrX:67805445-67848173 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035773
 protein coding gene ChrX:64359317-64412711 (+)
A/J MGP_AJ_G0035756
 protein coding gene ChrX:64483349-64529037 (+)
AKR/J MGP_AKRJ_G0035676
 protein coding gene ChrX:66209258-66273291 (+)
BALB/cJ MGP_BALBcJ_G0035743
 protein coding gene ChrX:63718564-63775153 (+)
C3H/HeJ MGP_C3HHeJ_G0035447
 protein coding gene ChrX:64783506-64841495 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036273
 protein coding gene ChrX:66301623-66344757 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033122
 protein coding gene ChrX:63552933-63591845 (+)
CAST/EiJ MGP_CASTEiJ_G0034737
 protein coding gene ChrX:50327003-50373053 (+)
CBA/J MGP_CBAJ_G0035420
 protein coding gene ChrX:68122175-68174116 (+)
DBA/2J MGP_DBA2J_G0035573
 protein coding gene ChrX:64076839-64124747 (+)
FVB/NJ MGP_FVBNJ_G0035524
 protein coding gene ChrX:63544168-63585027 (+)
LP/J MGP_LPJ_G0035661
 protein coding gene ChrX:65170514-65213158 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035560
 protein coding gene ChrX:70493684-70546573 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036294
 protein coding gene ChrX:64198080-64242445 (+)
PWK/PhJ MGP_PWKPhJ_G0034437
 protein coding gene ChrX:48494706-48538458 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034276
 protein coding gene ChrX:51296578-51335955 (+)
WSB/EiJ MGP_WSBEiJ_G0034880
 protein coding gene ChrX:63553919-63595949 (+)



Homology
more
  • Human Ortholog
    FMR1NB, FMR1 neighbor
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FMR1NB, FMR1 neighbor
  • Synonyms
    CT37, NY-SAR-35, NYSAR35
  • Links
    NCBI Gene ID: 158521
    neXtProt AC: NX_Q8N0W7
    UniProt: Q8N0W7

  • Chr Location
    Xq27.3-q28; chrX:147981337-148026665 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    752
  • Tissues
    46
  • cDNA Data
    20
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 207854 NCBI Gene Model | MGI Sequence Detail 42708 C57BL/6J ±  kb
transcript NM_174993 RefSeq | MGI Sequence Detail 916 C57BL/6  
polypeptide Q80ZA7 UniProt | EBI | MGI Sequence Detail 238 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 4
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:85115 Lee SY, et al., Immunomic analysis of human sarcoma. Proc Natl Acad Sci U S A. 2003 Mar 4;100(5):2651-6
  • Latest
    J:292550 Morimoto K, et al., Reverse genetics reveals single gene of every candidate on Hybrid sterility, X Chromosome QTL 2 (Hstx2) are dispensable for spermatogenesis. Sci Rep. 2020 Jun 3;10(1):9060
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory