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Fam43a Gene Detail
Summary
  • Symbol
    Fam43a
  • Name
    family with sequence similarity 43, member A
  • Feature Type
    protein coding gene
  • IDs
    MGI:2676309
    NCBI Gene: 224093
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:30418541-30421615 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 21.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    133 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676309
 protein coding gene Chr16:30418541-30421615 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022715
 protein coding gene Chr16:28514726-28518044 (+)
A/J MGP_AJ_G0022678
 protein coding gene Chr16:27204053-27207179 (+)
AKR/J MGP_AKRJ_G0022652
 protein coding gene Chr16:28232481-28235555 (+)
BALB/cJ MGP_BALBcJ_G0022682
 protein coding gene Chr16:27376774-27379838 (+)
C3H/HeJ MGP_C3HHeJ_G0022447
 protein coding gene Chr16:28335417-28338491 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023131
 protein coding gene Chr16:29131063-29134137 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020649
 protein coding gene Chr16:27635143-27638305 (+)
CAST/EiJ MGP_CASTEiJ_G0021975
 protein coding gene Chr16:28434170-28438678 (+)
CBA/J MGP_CBAJ_G0022417
 protein coding gene Chr16:30365978-30369052 (+)
DBA/2J MGP_DBA2J_G0022550
 protein coding gene Chr16:27078089-27081163 (+)
FVB/NJ MGP_FVBNJ_G0022525
 protein coding gene Chr16:27056991-27060061 (+)
LP/J MGP_LPJ_G0022617
 protein coding gene Chr16:28336820-28339894 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022544
 protein coding gene Chr16:29859589-29862680 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023143
 protein coding gene Chr16:28192402-28195466 (+)
PWK/PhJ MGP_PWKPhJ_G0021714
 protein coding gene Chr16:27389269-27392459 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021545
 protein coding gene Chr16:27953964-27957016 (+)
WSB/EiJ MGP_WSBEiJ_G0022019
 protein coding gene Chr16:28137806-28140887 (+)



Homology
more
  • Human Ortholog
    FAM43A, family with sequence similarity 43 member A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM43A, family with sequence similarity 43 member A
  • Links
    NCBI Gene ID: 131583
    neXtProt AC: NX_Q8N2R8
    UniProt: Q8N2R8

  • Chr Location
    3q29; chr3:194685883-194689037 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 224093 NCBI Gene Model | MGI Sequence Detail 3075 C57BL/6J ±  kb
transcript NM_177632 RefSeq | MGI Sequence Detail 3075 C57BL/6  
polypeptide Q8BUP8 UniProt | EBI | MGI Sequence Detail 424 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Phenotypes 7
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory