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Mir200a Gene Detail
Summary
  • Symbol
    Mir200a
  • Name
    microRNA 200a
  • Synonyms
    Mirn200a, mmu-mir-200a
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676874
    NCBI Gene: 387242
  • Member of
    Mirc4 cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:156139353-156139442 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 87.96 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676874
 miRNA gene Chr4:156139353-156139442 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008792
 miRNA gene Chr4:160426163-160426252 (-)
A/J MGP_AJ_G0008775
 miRNA gene Chr4:153666301-153666390 (-)
AKR/J MGP_AKRJ_G0008767
 miRNA gene Chr4:157847204-157847293 (-)
BALB/cJ MGP_BALBcJ_G0008765
 miRNA gene Chr4:154140803-154140892 (-)
C3H/HeJ MGP_C3HHeJ_G0008705
 miRNA gene Chr4:158408837-158408926 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008987
 miRNA gene Chr4:166116229-166116318 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007927
 miRNA gene Chr4:145944400-145944489 (-)
CAST/EiJ MGP_CASTEiJ_G0008545
 miRNA gene Chr4:155848112-155848201 (-)
CBA/J MGP_CBAJ_G0008671
 miRNA gene Chr4:171151111-171151200 (-)
DBA/2J MGP_DBA2J_G0008701
 miRNA gene Chr4:153687759-153687848 (-)
FVB/NJ MGP_FVBNJ_G0008721
 miRNA gene Chr4:152934225-152934314 (-)
LP/J MGP_LPJ_G0008796
 miRNA gene Chr4:160363604-160363693 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008687
 miRNA gene Chr4:173945527-173945616 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008968
 miRNA gene Chr4:158493644-158493733 (-)
PWK/PhJ MGP_PWKPhJ_G0008476
 miRNA gene Chr4:149828188-149828277 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008328
 miRNA gene Chr4:152739425-152739514 (-)
WSB/EiJ MGP_WSBEiJ_G0008643
 miRNA gene Chr4:158659457-158659546 (-)



Homology
more
  • Human Ortholog
    MIR200A, microRNA 200a
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR200A, microRNA 200a
  • Synonyms
    mir-200a, MIRN200A
  • Links
    NCBI Gene ID: 406983

  • Chr Location
    chr1:1167863-1167952 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    12
  • Literature Summary
    19
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 387242 NCBI Gene Model | MGI Sequence Detail 90 C57BL/6J ±  kb
transcript NR_029723 RefSeq | MGI Sequence Detail 90 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    Primer pair 3
    Other 3
Other Database
Links
less
miRBase MI0000554
References
more
  • Summaries
    All 58
    Developmental Gene Expression 19
    Gene Ontology 7
    Phenotypes 2
  • Earliest
    J:84908 Lagos-Quintana M, et al., New microRNAs from mouse and human. RNA. 2003 Feb;9(2):175-9
  • Latest
    J:331421 Funato N, et al., TBX1 targets the miR-200-ZEB2 axis to induce epithelial differentiation and inhibit stem cell properties. Sci Rep. 2022 Nov 23;12(1):20188
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory